BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006498
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    83   5e-14
ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein A...    82   7e-14
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   1e-13
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    79   1e-12
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    79   1e-12

>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 7/219 (3%)
 Frame = +2

Query: 8    RKGQFSVKSVYNV-----ISNRT*FIAGTIIVPPQVWKSLWSVKLPHKVKLFAWKCIRDI 172
            R G FSV+S Y+        ++     G       VW +LW +++P K+K+FAW+ +  +
Sbjct: 824  RSGIFSVRSAYHCQWNAKFGSKERLPDGASSSSRPVWDNLWKLEIPPKIKIFAWRMLHGV 883

Query: 173  IPTRDKLCTYKTGIEIHCSLCNHVFESFDHLFLNCPYARSVWLAVNI--NVHTVLAQHGS 346
            IP +  L      ++  C +C+   E   H+   C  A+ +W  + I   +  +L    S
Sbjct: 884  IPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQLGIWSRIQPILGFDRS 943

Query: 347  FRNWVISWFSAGANIVFGSGITRIEINNTLMVTAWTIWKDRCTKIFQNKNPDRALSVAGI 526
                V      G  +   S +  I +   ++  AW IW +R   +   +  + A S   I
Sbjct: 944  GSVLVEEMIRKGGKV---SHLNAIGMTELILTGAWYIWWERRQLVQGERIQNPARSAMSI 1000

Query: 527  NSLTVSCSHSSDSNNNTFQVQRRIPPGDGYLKINLDASF 643
             +LT +   S+       Q   + PP +G L IN+DA+F
Sbjct: 1001 ATLTTNYMLSNKKGKTKIQNGWKKPP-EGMLMINVDAAF 1038


>ref|XP_003576632.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 475

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
 Frame = +2

Query: 14  GQFSVKSVYNVISNRT*FIAGTIIVPPQVWKSLWSVKLPHKVKLFAWKCIRDIIPTRDKL 193
           G++S KS Y+ +     F  G ++     WK  W    P +VK F W   +D   T ++ 
Sbjct: 314 GEYSSKSCYHSL-----FCGGVVL---DTWKLNWKSWAPPRVKFFLWLACQDRCWTAERR 365

Query: 194 CTYKTGIEIHCSLCNHVFESFDHLFLNCPYARSVWLAVNINVHTVLAQHG---SFRNWVI 364
             +       CSLC+   E+ +HL ++CP++RSVW  V   + +  A      SF +W  
Sbjct: 366 ARHGLAHASRCSLCDQTMETMNHLLVDCPFSRSVWYEVLSWIRSTGAPPTTGVSFADW-- 423

Query: 365 SWFSAGANIVFGSGITRIEINNTLMVTAWTIWKDRCTKIFQNKNPD 502
            W    A++     + R   ++ +M+TAW IWK R   +F N  P+
Sbjct: 424 -W---QASVHSAPSVARKGTSSIIMLTAWWIWKHRNAAVFDNATPN 465


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
 Frame = +2

Query: 8    RKGQFSVKSVY--NVISNRT*FIAGTIIVPPQVWKSLWSVKLPHKVKLFAWKCIRDIIPT 181
            + GQF+V+S Y   ++ +R    + +     ++W+ +W  K+P KVKLF+WK I + +  
Sbjct: 1018 KNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAV 1077

Query: 182  RDKLCTYKTGIEIHCSLCNHVFESFDHLFLNCPYARSVWLAVNINVHTVLAQHGSFRNWV 361
               +      I+  C  C    E+ +HL   C  +   W    + +HT   + GSFR WV
Sbjct: 1078 YTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWV 1137

Query: 362  ISWFSAGANIVFGSGITRIEINNTLMVTAWTIWKDRCTKIFQNKN------PDRALSVAG 523
             S      +  + +            +  W IW  R   +F+ K        +RA  V G
Sbjct: 1138 ESLLDTHKDTEWWA---------LFWMICWNIWLGRNKWVFEKKKLAFQEVVERA--VRG 1186

Query: 524  INSLTVSCSHSSDSNN-NTFQVQRRIPPGDGYLKINLDAS 640
            +      C+H+S     NT +    +PP  G +K+N+DA+
Sbjct: 1187 VMEFEEECAHTSPVETLNTHENGWSVPP-VGMVKLNVDAA 1225


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
 Frame = +2

Query: 5   DRKGQFSVKSVYNVISNRT*FIAGTIIVPPQVWKSLWSVKLPHKVKLFAWKCIRDIIPTR 184
           +  G++SV+S Y +       I  + +  P  W  +W +K+P K+K F W+  R ++PTR
Sbjct: 138 ENDGKYSVRSAYTLCVEE--LIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLPTR 195

Query: 185 DKLCTYKTGIEIHCSLCNHVFESFDHLFLNCPYARSVWLAVNINVHTVLAQHGSFRNWVI 364
           +KL          C  C+   E   HLF  C +   VW          L+   S     +
Sbjct: 196 NKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVW---------QLSDLWSEIQQAV 246

Query: 365 SWFSAGANIVFGSGITRIEINNT-LMVTAWTIWKDRCTKIFQNKNPDRALSV 517
             F   + ++F   + R  +  + + VT W++WK R  K+++NKN   A++V
Sbjct: 247 IHFDTASAVIFDL-LQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAMTV 297


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
 Frame = +2

Query: 5   DRKGQFSVKSVYNVISNRT*FIAGTIIVPPQVWKSLWSVKLPHKVKLFAWKCIRDIIPTR 184
           +  G++SV+S Y +       I  + +  P  W  +W +K+P K+K F W+  R ++PTR
Sbjct: 231 ENDGKYSVRSAYTLCVEE--LIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLPTR 288

Query: 185 DKLCTYKTGIEIHCSLCNHVFESFDHLFLNCPYARSVWLAVNINVHTVLAQHGSFRNWVI 364
           +KL          C  C+   E   HLF  C +   VW          L+   S     +
Sbjct: 289 NKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVW---------QLSDLWSEIQQAV 339

Query: 365 SWFSAGANIVFGSGITRIEINNT-LMVTAWTIWKDRCTKIFQNKNPDRALSV 517
             F   + ++F   + R  +  + + VT W++WK R  K+++NKN   A++V
Sbjct: 340 IHFDTASAVIFDL-LQRFTLEQSQIFVTMWSLWKRRNLKVWENKNESCAMTV 390