BLASTX nr result

ID: Papaver23_contig00006419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006419
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...    79   8e-13
ref|XP_002319467.1| global transcription factor group [Populus t...    79   8e-13
ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens ...    78   2e-12
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...    77   3e-12
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]    77   3e-12

>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 761  QIVNLAH--LGPDTIDMTVVFKDLERPVLEICSIPYKFLTDIKHRLNYACVKYYVNRESL 588
            +IVNL    LG    DMT+VFKD +R VL I SIP   L  IK  LN   +KYY +R +L
Sbjct: 867  EIVNLERIGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDSIKEWLNTTDLKYYESRLNL 926

Query: 587  NWKEFVSDIRARPDKFIANGGWDFL 513
            NW+  +  I   P+KFI +GGW+FL
Sbjct: 927  NWRPILKTITDDPEKFIEDGGWEFL 951


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
            gi|222857843|gb|EEE95390.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1053

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 761  QIVNLAH--LGPDTIDMTVVFKDLERPVLEICSIPYKFLTDIKHRLNYACVKYYVNRESL 588
            +IVNL    LG    DMTVVFKD +R VL I SIP   L  IK  LN   +KYY +R +L
Sbjct: 870  EIVNLERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLNTTDLKYYESRLNL 929

Query: 587  NWKEFVSDIRARPDKFIANGGWDFL 513
            NW+  +  I   P+KFI +GGW+FL
Sbjct: 930  NWRPILKTITDDPEKFIEDGGWEFL 954


>ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens subsp. patens]
            gi|162664770|gb|EDQ51477.1| FACT complex subunit
            [Physcomitrella patens subsp. patens]
          Length = 1065

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = -1

Query: 761  QIVNLAH--LGPDTIDMTVVFKDLERPVLEICSIPYKFLTDIKHRLNYACVKYYVNRESL 588
            +IVNL    LG    DM +VFKD +R VL I +IP   L  IK  LN   +KYY +R +L
Sbjct: 864  EIVNLERVGLGQKAFDMAIVFKDFKREVLRIDAIPSTSLDGIKEWLNSMNIKYYESRMNL 923

Query: 587  NWKEFVSDIRARPDKFIANGGWDFL 513
            NW+  +  I   PDKFI +GGW+FL
Sbjct: 924  NWRPILKTILEDPDKFIEDGGWEFL 948


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 761  QIVNLAH--LGPDTIDMTVVFKDLERPVLEICSIPYKFLTDIKHRLNYACVKYYVNRESL 588
            +IVNL    LG    DMT+VFKD +R VL I SIP   L  IK  L+   +KYY +R +L
Sbjct: 870  EIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNL 929

Query: 587  NWKEFVSDIRARPDKFIANGGWDFL 513
            NW+  +  I   P+KFI +GGW+FL
Sbjct: 930  NWRPILKTITEDPEKFIEDGGWEFL 954


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 761  QIVNLAH--LGPDTIDMTVVFKDLERPVLEICSIPYKFLTDIKHRLNYACVKYYVNRESL 588
            +IVNL    LG    DMT+VFKD +R VL I SIP   L  IK  L+   +KYY +R +L
Sbjct: 818  EIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNL 877

Query: 587  NWKEFVSDIRARPDKFIANGGWDFL 513
            NW+  +  I   P+KFI +GGW+FL
Sbjct: 878  NWRPILKTITEDPEKFIEDGGWEFL 902


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