BLASTX nr result

ID: Papaver23_contig00006328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006328
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521386.1| structural constituent of ribosome, putative...    88   9e-16
ref|XP_002276959.1| PREDICTED: uncharacterized protein LOC100265...    86   5e-15
ref|NP_001030692.1| Ribosomal protein L34 [Arabidopsis thaliana]...    86   5e-15
emb|CAG23918.1| LIN1 protein [Cicer arietinum]                         86   6e-15
ref|XP_002882857.1| structural constituent of ribosome [Arabidop...    85   8e-15

>ref|XP_002521386.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223539464|gb|EEF41054.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 195

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 53/121 (43%), Positives = 70/121 (57%)
 Frame = +1

Query: 151 TRTLGRASTSLIKQFLNHPQKPVLNHKLLLTQTSSEITPNLFPSFQNLQNNRIYSPESEE 330
           T+TL R   SL+ + +N   + +L H L       EITP LFPS    QN+ ++ P+++ 
Sbjct: 3   TKTLIRTGASLMNRMIN---RQILAHSL-------EITPQLFPSISKFQNS-LHFPQNDT 51

Query: 331 EIMNRLSYQGFLYPCGLPSLRFFXXXXXXXXXXXXXXXXXKRTYQPSTIKRKRRHGFFAR 510
             + RLS +GFL+P GLPSLRFF                 KRT+QPS I+RKR HGFFAR
Sbjct: 52  LSITRLSNEGFLHPSGLPSLRFFLPDGDSSSEPMLLFP--KRTFQPSLIRRKRNHGFFAR 109

Query: 511 K 513
           K
Sbjct: 110 K 110


>ref|XP_002276959.1| PREDICTED: uncharacterized protein LOC100265274 [Vitis vinifera]
           gi|297743038|emb|CBI35905.3| unnamed protein product
           [Vitis vinifera]
          Length = 147

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 60/148 (40%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
 Frame = +1

Query: 151 TRTLGRASTSLIKQFLNHP---QKPVLNHKLLLTQTSSEITPNLFPSFQNLQNNRIYSPE 321
           ++TL RA  SLIK   N     Q    NH++LL+  S  +TP LFPS    Q +      
Sbjct: 3   SKTLIRAGASLIKGLSNRSLLHQNTTPNHRILLSG-SVGVTPKLFPSLAKPQPSLHLHET 61

Query: 322 SEEEIMNRLSY--QGFLYPCGLPSLRFFXXXXXXXXXXXXXXXXXKRTYQPSTIKRKRRH 495
            + +I+  L++  Q   YPCGLPSLRFF                 KRTYQPS IKRKR H
Sbjct: 62  LDSQILKELAFDSQALFYPCGLPSLRFFLPDGDSSSEPMLLFP--KRTYQPSHIKRKRTH 119

Query: 496 GFFARKXXXXXXXXXXXXXXXXXSRITV 579
           GFFARK                 SRITV
Sbjct: 120 GFFARKATKGGRRVIARRVAKGRSRITV 147


>ref|NP_001030692.1| Ribosomal protein L34 [Arabidopsis thaliana]
           gi|29824329|gb|AAP04125.1| unknown protein [Arabidopsis
           thaliana] gi|110739249|dbj|BAF01538.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332641910|gb|AEE75431.1| Ribosomal protein L34
           [Arabidopsis thaliana]
          Length = 147

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
 Frame = +1

Query: 154 RTLGRASTSLIKQFLNHPQKPVLNHKL-----LLTQTSSEITPNLFPSFQNLQNNRIYSP 318
           +TL R+  SL+ +FL  P   ++ + L      +     EI P  FPS  NLQ++ I  P
Sbjct: 4   KTLIRSGASLMNRFLTKPTTNIVQNNLRSSFQYIAPQGQEIPPYFFPSLSNLQSSLISRP 63

Query: 319 ESEEEIMNRLSYQGFLYPCGLPSLRFFXXXXXXXXXXXXXXXXXKRTYQPSTIKRKRRHG 498
            ++   +  L+ +GFLYP GLPSL FF                 KRT+QPSTI+RKR HG
Sbjct: 64  -NDTASLQELNERGFLYPSGLPSLEFFLPEVDPSSEPLLLFP--KRTFQPSTIRRKRNHG 120

Query: 499 FFARK 513
           FFARK
Sbjct: 121 FFARK 125


>emb|CAG23918.1| LIN1 protein [Cicer arietinum]
          Length = 134

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 50/121 (41%), Positives = 63/121 (52%)
 Frame = +1

Query: 151 TRTLGRASTSLIKQFLNHPQKPVLNHKLLLTQTSSEITPNLFPSFQNLQNNRIYSPESEE 330
           ++TL R   +L+ +      K +LN        S+   P +FPS   LQN   +     E
Sbjct: 3   SKTLLRNGVALLNRLSLSNSKSLLN--------SNNPQPYIFPSLSKLQN---FPQNDAE 51

Query: 331 EIMNRLSYQGFLYPCGLPSLRFFXXXXXXXXXXXXXXXXXKRTYQPSTIKRKRRHGFFAR 510
              N +S +GFLYPCGLPSLRFF                 KRT+QPSTI+RKR HGFFAR
Sbjct: 52  SAKNLISSEGFLYPCGLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFAR 111

Query: 511 K 513
           K
Sbjct: 112 K 112


>ref|XP_002882857.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297328697|gb|EFH59116.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 147

 Score = 85.1 bits (209), Expect = 8e-15
 Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
 Frame = +1

Query: 154 RTLGRASTSLIKQFLNHPQKPVLNHKLL-----LTQTSSEITPNLFPSFQNLQNNRIYSP 318
           +TL R+  SL+ +FL+ P   ++ + L      +     EI P  FPS  NLQ++ I  P
Sbjct: 4   KTLIRSGASLMNRFLSKPTTNLVQNNLRSSFQQIAPQGQEIPPYFFPSLSNLQSSLISRP 63

Query: 319 ESEEEIMNRLSYQGFLYPCGLPSLRFFXXXXXXXXXXXXXXXXXKRTYQPSTIKRKRRHG 498
            ++   +  L+ +GFLYP GLPSL FF                 KRT+QPSTI+RKR HG
Sbjct: 64  -NDTASLQELNERGFLYPSGLPSLEFFLPEVDPSSEPLLLFP--KRTFQPSTIRRKRNHG 120

Query: 499 FFARK 513
           FFARK
Sbjct: 121 FFARK 125


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