BLASTX nr result

ID: Papaver23_contig00006182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006182
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315779.1| hypothetical protein POPTRDRAFT_566261 [Popu...   230   8e-59
ref|XP_002278284.1| PREDICTED: photosystem I reaction center sub...   230   1e-58
ref|XP_002520727.1| Photosystem I reaction center subunit II, ch...   229   2e-58
ref|XP_002516772.1| Photosystem I reaction center subunit II, ch...   229   2e-58
gb|ABK96621.1| unknown [Populus trichocarpa x Populus deltoides]      229   2e-58

>ref|XP_002315779.1| hypothetical protein POPTRDRAFT_566261 [Populus trichocarpa]
           gi|118487204|gb|ABK95430.1| unknown [Populus
           trichocarpa] gi|118487687|gb|ABK95668.1| unknown
           [Populus trichocarpa] gi|222864819|gb|EEF01950.1|
           hypothetical protein POPTRDRAFT_566261 [Populus
           trichocarpa]
          Length = 201

 Score =  230 bits (587), Expect = 8e-59
 Identities = 109/111 (98%), Positives = 111/111 (100%)
 Frame = -3

Query: 519 YVITWDSPKEQVFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 340
           YVITWDSPKEQ+FEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP
Sbjct: 91  YVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 150

Query: 339 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 187
           NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL
Sbjct: 151 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 201


>ref|XP_002278284.1| PREDICTED: photosystem I reaction center subunit II, chloroplastic
           [Vitis vinifera] gi|296085204|emb|CBI28699.3| unnamed
           protein product [Vitis vinifera]
          Length = 204

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/111 (98%), Positives = 111/111 (100%)
 Frame = -3

Query: 519 YVITWDSPKEQVFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 340
           YVITW+SPKEQ+FEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP
Sbjct: 94  YVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 153

Query: 339 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 187
           NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL
Sbjct: 154 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 204


>ref|XP_002520727.1| Photosystem I reaction center subunit II, chloroplast precursor,
           putative [Ricinus communis] gi|223540112|gb|EEF41689.1|
           Photosystem I reaction center subunit II, chloroplast
           precursor, putative [Ricinus communis]
          Length = 209

 Score =  229 bits (584), Expect = 2e-58
 Identities = 108/111 (97%), Positives = 110/111 (99%)
 Frame = -3

Query: 519 YVITWDSPKEQVFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 340
           YVITWDSPKEQ+FEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP
Sbjct: 99  YVITWDSPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 158

Query: 339 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 187
           NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQ YD+
Sbjct: 159 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDI 209


>ref|XP_002516772.1| Photosystem I reaction center subunit II, chloroplast precursor,
           putative [Ricinus communis] gi|223543860|gb|EEF45386.1|
           Photosystem I reaction center subunit II, chloroplast
           precursor, putative [Ricinus communis]
          Length = 208

 Score =  229 bits (583), Expect = 2e-58
 Identities = 108/111 (97%), Positives = 110/111 (99%)
 Frame = -3

Query: 519 YVITWDSPKEQVFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 340
           YVITWDSPKEQ+FEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP
Sbjct: 98  YVITWDSPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 157

Query: 339 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 187
           NGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKNVSPIEVKFTGKQ YDL
Sbjct: 158 NGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 208


>gb|ABK96621.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 201

 Score =  229 bits (583), Expect = 2e-58
 Identities = 108/111 (97%), Positives = 110/111 (99%)
 Frame = -3

Query: 519 YVITWDSPKEQVFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 340
           YVITWDSPKEQ+FEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP
Sbjct: 91  YVITWDSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP 150

Query: 339 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 187
           NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQ YDL
Sbjct: 151 NGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 201


Top