BLASTX nr result

ID: Papaver23_contig00006095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00006095
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...   122   4e-26
gb|AFK43698.1| unknown [Medicago truncatula]                          119   3e-25
ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thalian...   118   6e-25
ref|XP_002876049.1| clathrin adaptor complex small chain family ...   116   2e-24
ref|NP_001236188.1| uncharacterized protein LOC100306517 [Glycin...   115   3e-24

>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/72 (81%), Positives = 68/72 (94%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VETLDKCFKNVCELDVVFNFSKIHTILNEIIFGGQVLETSSTEVMKAVEEITKLEKASNA 180
           VETLDKCFKNVCELD+VFN+SK+HTIL+EIIFGGQVLETSS EVMKAVEEI++LE ASN 
Sbjct: 93  VETLDKCFKNVCELDIVFNYSKLHTILDEIIFGGQVLETSSAEVMKAVEEISRLETASNT 152

Query: 181 ITL-PRSVSGWQ 213
           ITL P+S+SGW+
Sbjct: 153 ITLVPKSISGWR 164


>gb|AFK43698.1| unknown [Medicago truncatula]
          Length = 166

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/74 (81%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   VETLDKCFKNVCELDVVFNFSKIHTILNEIIFGGQVLETSSTEVMKAVEEITKLEKASNA 180
           VETLDKCF+NVCELDVVFN+SK+HTIL+EIIFGGQVLETSS EV+KAVEEITKLE AS+A
Sbjct: 93  VETLDKCFRNVCELDVVFNYSKMHTILDEIIFGGQVLETSSAEVLKAVEEITKLEAASSA 152

Query: 181 ITL-PRSVSGWQVR 219
           I L P+SVS W+ R
Sbjct: 153 INLVPKSVSSWRSR 166


>ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thaliana]
           gi|75161581|sp|Q8VZ37.1|AP3S_ARATH RecName: Full=AP-3
           complex subunit sigma; AltName: Full=AP-3 complex
           subunit sigma-3; AltName: Full=Adapter-related protein
           complex 3 sigma subunit; AltName: Full=Sigma-adaptin 3;
           AltName: Full=Sigma3-adaptin gi|17529106|gb|AAL38763.1|
           putative clathrin coat assembly protein [Arabidopsis
           thaliana] gi|20465749|gb|AAM20343.1| putative clathrin
           coat assembly protein [Arabidopsis thaliana]
           gi|332645198|gb|AEE78719.1| AP-3 complex subunit sigma
           [Arabidopsis thaliana]
          Length = 166

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/74 (77%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   VETLDKCFKNVCELDVVFNFSKIHTILNEIIFGGQVLETSSTEVMKAVEEITKLEKASNA 180
           VETLDKCF NVCELD+VFN+SK+H +L+EI+FGGQVLETSS EVMKAVEEI+KLE ASN+
Sbjct: 93  VETLDKCFSNVCELDIVFNYSKMHAVLDEIVFGGQVLETSSAEVMKAVEEISKLEAASNS 152

Query: 181 ITL-PRSVSGWQVR 219
           I+L P+SVSGW+ R
Sbjct: 153 ISLVPKSVSGWRGR 166


>ref|XP_002876049.1| clathrin adaptor complex small chain family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321887|gb|EFH52308.1|
           clathrin adaptor complex small chain family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/74 (75%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   VETLDKCFKNVCELDVVFNFSKIHTILNEIIFGGQVLETSSTEVMKAVEEITKLEKASNA 180
           VETLDKCF NVCELD+VFN+SK+H +L+EI+FGGQVLETSS EV+KAVEEI+KLE ASN+
Sbjct: 93  VETLDKCFSNVCELDIVFNYSKMHAVLDEIVFGGQVLETSSAEVIKAVEEISKLEAASNS 152

Query: 181 ITL-PRSVSGWQVR 219
           I+L P+SVSGW+ R
Sbjct: 153 ISLVPKSVSGWRGR 166


>ref|NP_001236188.1| uncharacterized protein LOC100306517 [Glycine max]
           gi|255628757|gb|ACU14723.1| unknown [Glycine max]
          Length = 166

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/72 (77%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VETLDKCFKNVCELDVVFNFSKIHTILNEIIFGGQVLETSSTEVMKAVEEITKLEKASNA 180
           VETLDKCF+NVCELD+VFN+SK+HTIL+EII GGQVLETSS EVMKA+EEI++LE AS A
Sbjct: 93  VETLDKCFRNVCELDIVFNYSKMHTILDEIILGGQVLETSSNEVMKAIEEISRLESASKA 152

Query: 181 ITL-PRSVSGWQ 213
           I L P+SVSGW+
Sbjct: 153 INLVPKSVSGWR 164


Top