BLASTX nr result

ID: Papaver23_contig00005982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005982
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   187   1e-45
ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumi...   183   2e-44
ref|XP_004173054.1| PREDICTED: F-box protein SKIP28-like, partia...   179   4e-43
gb|AFK41645.1| unknown [Lotus japonicus]                              167   2e-39
gb|AFK36453.1| unknown [Lotus japonicus]                              167   2e-39

>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  187 bits (474), Expect = 1e-45
 Identities = 93/194 (47%), Positives = 128/194 (65%)
 Frame = +1

Query: 1   PACTRLTPDGIVRIVKKLTDGSNKHNLRYLRLCGIPNLTKEHLQVLNSCLLQHKNVTSSD 180
           PACT LTP+GI+R VK LT+  +   L+ +R+ G+ N+ KEHL+ L+S L     +  + 
Sbjct: 143 PACTGLTPEGIMRAVKTLTE--HYQALKCVRINGVYNMKKEHLETLSSYL----QMNPAK 196

Query: 181 RPRKHYTLTDYNKQRSQWNYEVEANDNHIDVEICPKCENVSLVFDCPKESCVKKKNENPL 360
              +   L  ++  R+     VE +   ID+EICP+C  V +VFDCP+E+C KKK E  +
Sbjct: 197 MEGQMQQLCFFHDHRNISVLRVEESYRPIDLEICPRCNEVRMVFDCPRETC-KKKRERAM 255

Query: 361 RECRGCCICIPRCEDCGECTDQAEDEVQETVCSDVLCLNCWLNLPKCNLCNKPYCPRHAD 540
            ECRGC  CIPRCE+CG+C +   +E  E VC+DVLC +CWL LPKCN CN+PYC RHA+
Sbjct: 256 AECRGCYFCIPRCEECGKCIEV--EEPGEVVCADVLCSDCWLQLPKCNFCNRPYCSRHAN 313

Query: 541 IYGATVTASTGFIC 582
           +  +T + STGFIC
Sbjct: 314 LQHST-SGSTGFIC 326


>ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumis sativus]
          Length = 336

 Score =  183 bits (465), Expect = 2e-44
 Identities = 91/197 (46%), Positives = 129/197 (65%), Gaps = 3/197 (1%)
 Frame = +1

Query: 1   PACTRLTPDGIVRIVKKLTDGSNKHNLRYLRLCGIPNLTKEHLQVLNSCLLQHKNVTSSD 180
           P CT LTP+G+VR VK L+  S  HNL+ L + GI N+  +HL+VL S LL+++++    
Sbjct: 146 PGCTSLTPEGVVRAVKTLSQDS--HNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQ 203

Query: 181 RPRKHYTLTDYNKQRSQWNYEVEAND--NHIDVEICPKCENVSLVFDCPKESCVKKKNEN 354
             R+ + L   +  R +    + ++D    IDV+ICPKC ++  V+DC +E C  K+ EN
Sbjct: 204 EWRQVHHLYHEHVDRPR----LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGEN 259

Query: 355 PLRECRGCCICIPRCEDCGECTDQAEDEVQETVCSDVLCLNCWLNLPKCNLCNKPYCPRH 534
            L +CRGC  CIPRCE+CG C D  +DE++E +CSD+LC +CW  LPKCN CN+PYC RH
Sbjct: 260 LLADCRGCICCIPRCEECGGCVD--DDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRH 317

Query: 535 ADIYGATVTAST-GFIC 582
            D     V++ST GF+C
Sbjct: 318 RD----NVSSSTAGFVC 330


>ref|XP_004173054.1| PREDICTED: F-box protein SKIP28-like, partial [Cucumis sativus]
          Length = 370

 Score =  179 bits (453), Expect = 4e-43
 Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 2/182 (1%)
 Frame = +1

Query: 1   PACTRLTPDGIVRIVKKLTDGSNKHNLRYLRLCGIPNLTKEHLQVLNSCLLQHKNVTSSD 180
           P CT LTP+G+VR VK L+  S  HNL+ L + GI N+  +HL+VL S LL+++++    
Sbjct: 146 PGCTSLTPEGVVRAVKTLSQDS--HNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQ 203

Query: 181 RPRKHYTLTDYNKQRSQWNYEVEAND--NHIDVEICPKCENVSLVFDCPKESCVKKKNEN 354
             R+ + L   +  R +    + ++D    IDV+ICPKC ++  V+DC +E C  K+ EN
Sbjct: 204 EWRQVHHLYHEHVDRPR----LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGEN 259

Query: 355 PLRECRGCCICIPRCEDCGECTDQAEDEVQETVCSDVLCLNCWLNLPKCNLCNKPYCPRH 534
            L +CRGC  CIPRCE+CG C D  +DE++E +CSD+LC +CW  LPKCN CN+PYC RH
Sbjct: 260 LLADCRGCICCIPRCEECGGCVD--DDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRH 317

Query: 535 AD 540
            D
Sbjct: 318 RD 319


>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  167 bits (422), Expect = 2e-39
 Identities = 83/178 (46%), Positives = 109/178 (61%)
 Frame = +1

Query: 1   PACTRLTPDGIVRIVKKLTDGSNKHNLRYLRLCGIPNLTKEHLQVLNSCLLQHKNVTSSD 180
           PACT +T +G+ R V+ L   SN   L  LR+ GI NL KEHL +L   L ++  +    
Sbjct: 125 PACTGITAEGVTRAVQTLCQRSNC--LSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQQ 182

Query: 181 RPRKHYTLTDYNKQRSQWNYEVEANDNHIDVEICPKCENVSLVFDCPKESCVKKKNENPL 360
             + +Y    Y+K+ S   +  E N   ID+E CPKC  V++V+DCPK  C+K+  E P 
Sbjct: 183 MQKPNY----YHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKR--EKPQ 236

Query: 361 RECRGCCICIPRCEDCGECTDQAEDEVQETVCSDVLCLNCWLNLPKCNLCNKPYCPRH 534
            +CRGC  CIPRCE+CG C    E+E  E  C+D+LCL CWL LPKCN CNKPYC +H
Sbjct: 237 VQCRGCKFCIPRCENCGGCVGSEEEE--EAACADILCLECWLQLPKCNFCNKPYCKQH 292


>gb|AFK36453.1| unknown [Lotus japonicus]
          Length = 299

 Score =  167 bits (422), Expect = 2e-39
 Identities = 83/178 (46%), Positives = 109/178 (61%)
 Frame = +1

Query: 1   PACTRLTPDGIVRIVKKLTDGSNKHNLRYLRLCGIPNLTKEHLQVLNSCLLQHKNVTSSD 180
           PACT +T +G+ R V+ L   SN   L  LR+ GI NL KEHL +L   L ++  +    
Sbjct: 125 PACTGITAEGVTRAVQTLCQRSNC--LSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQQ 182

Query: 181 RPRKHYTLTDYNKQRSQWNYEVEANDNHIDVEICPKCENVSLVFDCPKESCVKKKNENPL 360
             + +Y    Y+K+ S   +  E N   ID+E CPKC  V++V+DCPK  C+K+  E P 
Sbjct: 183 MQKPNY----YHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKR--EKPQ 236

Query: 361 RECRGCCICIPRCEDCGECTDQAEDEVQETVCSDVLCLNCWLNLPKCNLCNKPYCPRH 534
            +CRGC  CIPRCE+CG C    E+E  E  C+D+LCL CWL LPKCN CNKPYC +H
Sbjct: 237 VQCRGCKFCIPRCENCGGCVGSEEEE--EAACADILCLECWLQLPKCNFCNKPYCKQH 292


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