BLASTX nr result

ID: Papaver23_contig00005979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005979
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                      281   6e-74
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]   281   6e-74
emb|CAN79872.1| hypothetical protein VITISV_017186 [Vitis vinifera]   280   1e-73
emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera]   280   1e-73
ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259...   279   2e-73

>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score =  281 bits (719), Expect = 6e-74
 Identities = 138/195 (70%), Positives = 155/195 (79%)
 Frame = -2

Query: 587  LLAETGMLGCKPIDTPVEPNQKLGEDTDGIPVDKERYQRLVGRLIYLSHTRPDIAYSVSV 408
            LLAETGML CKP+ TP+E N +L E  D +P +K RYQRLVGRLIYLSHTRPD+AY+VSV
Sbjct: 922  LLAETGMLDCKPVATPIEQNHQLAEYLDQVPTNKGRYQRLVGRLIYLSHTRPDLAYAVSV 981

Query: 407  VSQFMHAPRETHMDAVYRILRYLKSAPAKGLLFSQNNHTKVEAYTDADWAGSVIDRRSTS 228
            VSQFMH P E HMDAV+RIL+YLKSAP KGL+FS+ +H  V  YTDADWAGS+ DRRSTS
Sbjct: 982  VSQFMHNPSEAHMDAVFRILQYLKSAPGKGLIFSKYSHLDVSGYTDADWAGSITDRRSTS 1041

Query: 227  GYCSFVGGNLVTWRSKKQSVVARSSAEAEFRAMAHGICEXXXXXXXXXXLGFSPKDPMRL 48
            GY +FVGGNLVTW+SKKQ VVARSSAEAE+R MA G+CE          LGF  K  M L
Sbjct: 1042 GYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMARGLCEMLWLRNLLNDLGFRQKKAMPL 1101

Query: 47   YCDNKAAISIAHNPV 3
            YCDNKAAI IAHNPV
Sbjct: 1102 YCDNKAAIEIAHNPV 1116


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score =  281 bits (719), Expect = 6e-74
 Identities = 135/195 (69%), Positives = 158/195 (81%)
 Frame = -2

Query: 587  LLAETGMLGCKPIDTPVEPNQKLGEDTDGIPVDKERYQRLVGRLIYLSHTRPDIAYSVSV 408
            LL ETGM GC+P DTP++PNQKLG+  DG  V+  RYQ+LVG+LIYLSHTRPDIA++VS+
Sbjct: 1247 LLKETGMSGCRPADTPIDPNQKLGDTNDGNLVNTTRYQKLVGKLIYLSHTRPDIAFAVSI 1306

Query: 407  VSQFMHAPRETHMDAVYRILRYLKSAPAKGLLFSQNNHTKVEAYTDADWAGSVIDRRSTS 228
            VSQFMH+P E H++AVYRILRYLKS P KGL F ++    +EAYTDADWAGSV DRRSTS
Sbjct: 1307 VSQFMHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTDADWAGSVTDRRSTS 1366

Query: 227  GYCSFVGGNLVTWRSKKQSVVARSSAEAEFRAMAHGICEXXXXXXXXXXLGFSPKDPMRL 48
            GYC+++ GNLVTWRSKKQSV ARSSAEAE+RAMAHG+CE          L    + PM+L
Sbjct: 1367 GYCTYIWGNLVTWRSKKQSVXARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKL 1426

Query: 47   YCDNKAAISIAHNPV 3
            YCDNKAAISIAHNPV
Sbjct: 1427 YCDNKAAISIAHNPV 1441


>emb|CAN79872.1| hypothetical protein VITISV_017186 [Vitis vinifera]
          Length = 908

 Score =  280 bits (717), Expect = 1e-73
 Identities = 134/195 (68%), Positives = 159/195 (81%)
 Frame = -2

Query: 587  LLAETGMLGCKPIDTPVEPNQKLGEDTDGIPVDKERYQRLVGRLIYLSHTRPDIAYSVSV 408
            LL ETGM GC+P+DTP++PNQKLG+  DG  V+  RYQ+LVG+LIYLSHTRPDIA++VS+
Sbjct: 650  LLKETGMSGCRPVDTPIDPNQKLGDTKDGNLVNTTRYQKLVGKLIYLSHTRPDIAFAVSI 709

Query: 407  VSQFMHAPRETHMDAVYRILRYLKSAPAKGLLFSQNNHTKVEAYTDADWAGSVIDRRSTS 228
            VSQFMH+P E H++AVYRILRYLKS P KGL F ++    +EAYTDADWAG V DRRS+S
Sbjct: 710  VSQFMHSPYEVHLEAVYRILRYLKSTPGKGLFFKKSKQKTIEAYTDADWAGLVTDRRSSS 769

Query: 227  GYCSFVGGNLVTWRSKKQSVVARSSAEAEFRAMAHGICEXXXXXXXXXXLGFSPKDPMRL 48
            GYC+++ GNLVTWRSKKQSVVARSSAEAE+RAMAHG+CE          L    + PM+L
Sbjct: 770  GYCTYIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKL 829

Query: 47   YCDNKAAISIAHNPV 3
            YCDNKAAISIAHNPV
Sbjct: 830  YCDNKAAISIAHNPV 844


>emb|CAN65603.1| hypothetical protein VITISV_021511 [Vitis vinifera]
          Length = 491

 Score =  280 bits (717), Expect = 1e-73
 Identities = 134/195 (68%), Positives = 158/195 (81%)
 Frame = -2

Query: 587 LLAETGMLGCKPIDTPVEPNQKLGEDTDGIPVDKERYQRLVGRLIYLSHTRPDIAYSVSV 408
           LL ETGM GC+P DTP++PNQKLG+  DG  V+  RYQ+LVG+LIYL HTRPDIA++VS+
Sbjct: 233 LLKETGMSGCRPADTPIDPNQKLGDTNDGNLVNTTRYQKLVGKLIYLCHTRPDIAFAVSI 292

Query: 407 VSQFMHAPRETHMDAVYRILRYLKSAPAKGLLFSQNNHTKVEAYTDADWAGSVIDRRSTS 228
           VSQFMH+P E H +AVYRILRYLKS P KGL F ++    +EAYT+ADWAGSVIDR+STS
Sbjct: 293 VSQFMHSPYEVHFEAVYRILRYLKSTPGKGLFFKKSEQKTIEAYTNADWAGSVIDRKSTS 352

Query: 227 GYCSFVGGNLVTWRSKKQSVVARSSAEAEFRAMAHGICEXXXXXXXXXXLGFSPKDPMRL 48
           GYC+++ GNLVTWRSKKQSVVARSSAEAE+RAMAHG+CE          L    + PM+L
Sbjct: 353 GYCTYIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKIPLEMPMKL 412

Query: 47  YCDNKAAISIAHNPV 3
           YCDNKAAISIAHNPV
Sbjct: 413 YCDNKAAISIAHNPV 427


>ref|XP_002274088.2| PREDICTED: uncharacterized protein LOC100259102 [Vitis vinifera]
          Length = 1624

 Score =  279 bits (714), Expect = 2e-73
 Identities = 132/195 (67%), Positives = 157/195 (80%)
 Frame = -2

Query: 587  LLAETGMLGCKPIDTPVEPNQKLGEDTDGIPVDKERYQRLVGRLIYLSHTRPDIAYSVSV 408
            LL E G+L CKP +TP+ PN KLGE  + +P DK RYQRLVG+LIYLSHTRPDIAY+VSV
Sbjct: 884  LLTEVGLLDCKPTETPIIPNHKLGEYPNQVPTDKGRYQRLVGKLIYLSHTRPDIAYAVSV 943

Query: 407  VSQFMHAPRETHMDAVYRILRYLKSAPAKGLLFSQNNHTKVEAYTDADWAGSVIDRRSTS 228
            VSQFMH P E HM AV +ILRYLKS+P KGL+FS+N+H +VE YTDADWAG+++DR+STS
Sbjct: 944  VSQFMHCPSEDHMSAVMQILRYLKSSPGKGLMFSKNDHLRVEEYTDADWAGNIMDRKSTS 1003

Query: 227  GYCSFVGGNLVTWRSKKQSVVARSSAEAEFRAMAHGICEXXXXXXXXXXLGFSPKDPMRL 48
            GY +FVGGNLVTWRSKKQ VVA SSAEAEFR MA G+CE          +GF+P   M+L
Sbjct: 1004 GYFTFVGGNLVTWRSKKQKVVALSSAEAEFRGMAKGLCELLWLRRLLTEIGFAPDSEMKL 1063

Query: 47   YCDNKAAISIAHNPV 3
            +CDNKAAI I+HNP+
Sbjct: 1064 FCDNKAAIDISHNPI 1078


Top