BLASTX nr result

ID: Papaver23_contig00005916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005916
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 is...   171   7e-41
gb|ADW66147.1| proteasome subunit beta type-4 [Solanum nigrum]        164   5e-39
ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arab...   164   9e-39
gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis tha...   161   5e-38
ref|NP_176040.1| proteasome subunit beta type-4 [Arabidopsis tha...   161   5e-38

>ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Vitis
           vinifera] gi|297746225|emb|CBI16281.3| unnamed protein
           product [Vitis vinifera]
          Length = 245

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/98 (81%), Positives = 89/98 (90%)
 Frame = +3

Query: 3   SMLGVHFEDDHIATGFGNHLARPILRAEHSNDMSFEDAVKLLEKCMLVLLYRDRSAINKL 182
           SM+GVHFED+H+ATGFGNHLARPILR E   D+SFED VKLLEKCM VLLYRDRSA+NKL
Sbjct: 148 SMIGVHFEDNHVATGFGNHLARPILRDEWHEDLSFEDGVKLLEKCMRVLLYRDRSAVNKL 207

Query: 183 QISNITEEGVTISQPYSLKTFWGLSAFKDPTKGAQGSW 296
           QI+ ITEEGVTISQPYSLKTFWG SAF++PT GA+GSW
Sbjct: 208 QIAKITEEGVTISQPYSLKTFWGFSAFQNPTVGAEGSW 245


>gb|ADW66147.1| proteasome subunit beta type-4 [Solanum nigrum]
          Length = 139

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/98 (77%), Positives = 88/98 (89%)
 Frame = +3

Query: 3   SMLGVHFEDDHIATGFGNHLARPILRAEHSNDMSFEDAVKLLEKCMLVLLYRDRSAINKL 182
           SM+GVH+EDDH+ATGFGNHLARPILR E   ++S+E+ VKLLEKCM VLLYRDRSA+NKL
Sbjct: 42  SMIGVHYEDDHVATGFGNHLARPILRDEWHENLSYEEGVKLLEKCMRVLLYRDRSAVNKL 101

Query: 183 QISNITEEGVTISQPYSLKTFWGLSAFKDPTKGAQGSW 296
           QI+ ITEEGVTISQPYSLKTFW  SAF++PT GA+GSW
Sbjct: 102 QIAKITEEGVTISQPYSLKTFWNFSAFQNPTVGAEGSW 139


>ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
           lyrata] gi|297337802|gb|EFH68219.1| hypothetical protein
           ARALYDRAFT_474808 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/98 (79%), Positives = 86/98 (87%)
 Frame = +3

Query: 3   SMLGVHFEDDHIATGFGNHLARPILRAEHSNDMSFEDAVKLLEKCMLVLLYRDRSAINKL 182
           SM+GV FEDDH+ATGFGNHLARPILR E   D+SFED VKLLEKCM VLLYRDRSAINKL
Sbjct: 149 SMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKL 208

Query: 183 QISNITEEGVTISQPYSLKTFWGLSAFKDPTKGAQGSW 296
           QI+ ITEEGVT+SQPYSLKTFW  S+F +PT GA+GSW
Sbjct: 209 QIAKITEEGVTVSQPYSLKTFWEFSSFHNPTAGAEGSW 246


>gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]
          Length = 246

 Score =  161 bits (408), Expect = 5e-38
 Identities = 77/98 (78%), Positives = 85/98 (86%)
 Frame = +3

Query: 3   SMLGVHFEDDHIATGFGNHLARPILRAEHSNDMSFEDAVKLLEKCMLVLLYRDRSAINKL 182
           SM+GV FEDDH+ATGFGNHLARPILR E   D+SFED VKLLEKCM VLLYRDRSAINKL
Sbjct: 149 SMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKL 208

Query: 183 QISNITEEGVTISQPYSLKTFWGLSAFKDPTKGAQGSW 296
           QI+ ITEEGVT+SQPYSLKT+W  S+F +PT GA GSW
Sbjct: 209 QIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246


>ref|NP_176040.1| proteasome subunit beta type-4 [Arabidopsis thaliana]
           gi|82581521|sp|Q7DLR9.2|PSB4_ARATH RecName:
           Full=Proteasome subunit beta type-4; AltName: Full=20S
           proteasome beta subunit G-1; AltName: Full=Proteasome
           component H; AltName: Full=Proteasome subunit beta
           type-7; Flags: Precursor
           gi|12323023|gb|AAG51500.1|AC058785_3 20S proteasome beta
           subunit (PBG1) [Arabidopsis thaliana]
           gi|14190405|gb|AAK55683.1|AF378880_1 At1g56450/F13N6_3
           [Arabidopsis thaliana] gi|15010590|gb|AAK73954.1|
           At1g56450/F13N6_3 [Arabidopsis thaliana]
           gi|15450551|gb|AAK96453.1| At1g56450/F13N6_3
           [Arabidopsis thaliana] gi|62320870|dbj|BAD93840.1|
           putative protein [Arabidopsis thaliana]
           gi|332195276|gb|AEE33397.1| proteasome subunit beta
           type-4 [Arabidopsis thaliana]
          Length = 246

 Score =  161 bits (408), Expect = 5e-38
 Identities = 77/98 (78%), Positives = 85/98 (86%)
 Frame = +3

Query: 3   SMLGVHFEDDHIATGFGNHLARPILRAEHSNDMSFEDAVKLLEKCMLVLLYRDRSAINKL 182
           SM+GV FEDDH+ATGFGNHLARPILR E   D+SFED VKLLEKCM VLLYRDRSAINKL
Sbjct: 149 SMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKL 208

Query: 183 QISNITEEGVTISQPYSLKTFWGLSAFKDPTKGAQGSW 296
           QI+ ITEEGVT+SQPYSLKT+W  S+F +PT GA GSW
Sbjct: 209 QIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246


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