BLASTX nr result

ID: Papaver23_contig00005912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005912
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidops...    92   9e-17
ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis ...    92   9e-17
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...    92   9e-17
ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arab...    91   2e-16
ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...    89   8e-16

>ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
           gi|332193409|gb|AEE31530.1| CTC-interacting domain 11
           protein [Arabidopsis thaliana]
          Length = 406

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 56/127 (44%), Positives = 68/127 (53%)
 Frame = -3

Query: 382 QRNMRELEELLSKLNPMAEEFIPRPTSLVTAKFXXXXXXXXXXXXXXXXNFVLTTPMPMM 203
           +R+MREL+EL SKLNPMAEEF+P   +                       F  T      
Sbjct: 80  KRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGT------ 133

Query: 202 LXXXXXXXXXXXXXXXXDGRRKRFSYSQGRRKMNTRTRMAQRDDVIRRTVYVSDIDQQVT 23
                             G R++ S+ QG+R+MN RT MAQR+DVIRRTVYVSD+DQQVT
Sbjct: 134 --------GNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVT 185

Query: 22  EEQLAAL 2
           EEQLA L
Sbjct: 186 EEQLAGL 192


>ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
           gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17
           [Arabidopsis thaliana] gi|332193408|gb|AEE31529.1|
           CTC-interacting domain 11 protein [Arabidopsis thaliana]
          Length = 358

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 56/127 (44%), Positives = 68/127 (53%)
 Frame = -3

Query: 382 QRNMRELEELLSKLNPMAEEFIPRPTSLVTAKFXXXXXXXXXXXXXXXXNFVLTTPMPMM 203
           +R+MREL+EL SKLNPMAEEF+P   +                       F  T      
Sbjct: 80  KRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGT------ 133

Query: 202 LXXXXXXXXXXXXXXXXDGRRKRFSYSQGRRKMNTRTRMAQRDDVIRRTVYVSDIDQQVT 23
                             G R++ S+ QG+R+MN RT MAQR+DVIRRTVYVSD+DQQVT
Sbjct: 134 --------GNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVT 185

Query: 22  EEQLAAL 2
           EEQLA L
Sbjct: 186 EEQLAGL 192


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541913|gb|EEF43459.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 379

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 59/127 (46%), Positives = 73/127 (57%)
 Frame = -3

Query: 382 QRNMRELEELLSKLNPMAEEFIPRPTSLVTAKFXXXXXXXXXXXXXXXXNFVLTTPMPMM 203
           QR++REL+EL SKLNPMAEEF+P   SL   K                           M
Sbjct: 94  QRDIRELQELFSKLNPMAEEFVP--PSLANNKISNNYIHGLNGLNVGFYTNNNNYDPAFM 151

Query: 202 LXXXXXXXXXXXXXXXXDGRRKRFSYSQGRRKMNTRTRMAQRDDVIRRTVYVSDIDQQVT 23
           L                  RRK+ +Y+QG+R++N+RT MAQR+++IRRTVYVSDIDQQVT
Sbjct: 152 LTNASRNGQLNGSA----ARRKK-NYNQGKRRLNSRTSMAQREEIIRRTVYVSDIDQQVT 206

Query: 22  EEQLAAL 2
           EEQLAAL
Sbjct: 207 EEQLAAL 213


>ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
           lyrata] gi|297339584|gb|EFH70001.1| hypothetical protein
           ARALYDRAFT_473465 [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 55/127 (43%), Positives = 68/127 (53%)
 Frame = -3

Query: 382 QRNMRELEELLSKLNPMAEEFIPRPTSLVTAKFXXXXXXXXXXXXXXXXNFVLTTPMPMM 203
           +R+MREL+EL SKLNPMAEEF+P   +                          T+     
Sbjct: 83  KRDMRELQELFSKLNPMAEEFVPPSLT----------KQGGNGGLNGVNGGFFTSAGSFF 132

Query: 202 LXXXXXXXXXXXXXXXXDGRRKRFSYSQGRRKMNTRTRMAQRDDVIRRTVYVSDIDQQVT 23
                             G R++ S+ QG+R+MN RT MAQR+DVIRRTVYVSD+DQQVT
Sbjct: 133 RNNGFSGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVT 192

Query: 22  EEQLAAL 2
           EEQLA L
Sbjct: 193 EEQLAGL 199


>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 55/125 (44%), Positives = 69/125 (55%)
 Frame = -3

Query: 376 NMRELEELLSKLNPMAEEFIPRPTSLVTAKFXXXXXXXXXXXXXXXXNFVLTTPMPMMLX 197
           +MREL+EL SKLNPMAEEF+  P SL                                  
Sbjct: 134 DMRELQELFSKLNPMAEEFV--PPSLANNGLNGG------------------------FY 167

Query: 196 XXXXXXXXXXXXXXXDGRRKRFSYSQGRRKMNTRTRMAQRDDVIRRTVYVSDIDQQVTEE 17
                          +GRRK+ ++ QG+R+MN+RT MAQR+++IRRTVYVSDIDQQVTEE
Sbjct: 168 SNGSETHNNTRNGQVNGRRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEE 227

Query: 16  QLAAL 2
           +LAAL
Sbjct: 228 KLAAL 232


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