BLASTX nr result

ID: Papaver23_contig00005893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005893
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631761.1| PREDICTED: transcription initiation factor T...   490   e-136
ref|XP_002515435.1| protein with unknown function [Ricinus commu...   485   e-135
ref|XP_004145505.1| PREDICTED: transcription initiation factor T...   484   e-134
ref|XP_002285276.2| PREDICTED: transcription initiation factor T...   483   e-134
ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2...   478   e-133

>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
            isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
            unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  490 bits (1262), Expect = e-136
 Identities = 235/278 (84%), Positives = 249/278 (89%)
 Frame = +2

Query: 2    QGGNGTTTTEQLVGTDDGKRSYTLFQGHAGSVNSATFSPLGDFILSSSSDSTIRLWSTKL 181
            QG N    TEQ++GT  GKRSYTLFQGH+G V SATFSPLGDFILSSS+DSTIRLWSTKL
Sbjct: 397  QGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSSSADSTIRLWSTKL 456

Query: 182  NANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 361
            NANLVCYKGHNYPVWDVQFSP+GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ
Sbjct: 457  NANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 516

Query: 362  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 541
            WH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG+YMASGDEDGTIM
Sbjct: 517  WHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDGQYMASGDEDGTIM 576

Query: 542  MWDLSSGRCVTPLTGHTSCVWALDFXXXXXXXXXXXXDCTVKLWDVTASTKIPRAEENKA 721
            MWDLSSGRCV PL GH SCVW+L F            D TVKLWDVT STK+PR+EENK+
Sbjct: 577  MWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLLASGSADSTVKLWDVTTSTKVPRSEENKS 636

Query: 722  GSTNRLRSLKTLPTKSTPVYSLRFSRRNLLFASGVLSK 835
            G+T+RLRSLKTLPTKSTPVYSLRFSRRNLLFA+G LSK
Sbjct: 637  GNTSRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSK 674


>ref|XP_002515435.1| protein with unknown function [Ricinus communis]
            gi|223545379|gb|EEF46884.1| protein with unknown function
            [Ricinus communis]
          Length = 670

 Score =  485 bits (1248), Expect = e-135
 Identities = 231/278 (83%), Positives = 248/278 (89%)
 Frame = +2

Query: 2    QGGNGTTTTEQLVGTDDGKRSYTLFQGHAGSVNSATFSPLGDFILSSSSDSTIRLWSTKL 181
            QG N T  +E  +G +  KRSYTLFQGH+G V SATFSPLGDFILSSS+D+TIRLWSTKL
Sbjct: 391  QGANDTAASEHFLGANGAKRSYTLFQGHSGPVYSATFSPLGDFILSSSADTTIRLWSTKL 450

Query: 182  NANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 361
            NANLVCYKGHNYPVWDVQFSPVGHYFAS+SHDRTARIWSMDR+QPLRI+AGHLSDVDCVQ
Sbjct: 451  NANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDRLQPLRILAGHLSDVDCVQ 510

Query: 362  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 541
            WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGR+MAS DEDGTIM
Sbjct: 511  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRFMASADEDGTIM 570

Query: 542  MWDLSSGRCVTPLTGHTSCVWALDFXXXXXXXXXXXXDCTVKLWDVTASTKIPRAEENKA 721
            MWDLSSGRCV+PL GH SCVW L F            DCTVKLWDVT+STK+ +AEE+K+
Sbjct: 571  MWDLSSGRCVSPLMGHNSCVWTLAFSCEGSLLASGSADCTVKLWDVTSSTKVTKAEESKS 630

Query: 722  GSTNRLRSLKTLPTKSTPVYSLRFSRRNLLFASGVLSK 835
            GS NRLRSLKTLPTKSTPVYSLRFSRRNLLFA+GVLSK
Sbjct: 631  GSANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGVLSK 668


>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
            [Cucumis sativus] gi|449485181|ref|XP_004157092.1|
            PREDICTED: transcription initiation factor TFIID subunit
            5-like [Cucumis sativus]
          Length = 674

 Score =  484 bits (1246), Expect = e-134
 Identities = 231/280 (82%), Positives = 247/280 (88%)
 Frame = +2

Query: 2    QGGNGTTTTEQLVGTDDGKRSYTLFQGHAGSVNSATFSPLGDFILSSSSDSTIRLWSTKL 181
            Q  N  +T++ + G   GKR YTLFQGH+G V+SATFSP+GDF+LSSS+D+TIRLWSTKL
Sbjct: 392  QDENDMSTSDPVTGHTSGKRPYTLFQGHSGPVHSATFSPIGDFVLSSSADTTIRLWSTKL 451

Query: 182  NANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 361
            NANLVCYKGHNYPVWDVQFSPVGHYFAS SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ
Sbjct: 452  NANLVCYKGHNYPVWDVQFSPVGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 511

Query: 362  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 541
            WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGR+MASGDEDGTIM
Sbjct: 512  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRFMASGDEDGTIM 571

Query: 542  MWDLSSGRCVTPLTGHTSCVWALDFXXXXXXXXXXXXDCTVKLWDVTASTKIPRAEENKA 721
            MWDLS+GRCVTPL GHTSCVW L F            DCTVKLWDVT+STK PR +ENK 
Sbjct: 572  MWDLSTGRCVTPLIGHTSCVWTLAFSCEGSLLASGSADCTVKLWDVTSSTKPPRTDENKT 631

Query: 722  GSTNRLRSLKTLPTKSTPVYSLRFSRRNLLFASGVLSKGA 841
            G+ NRLRSLKTLPTKSTPVYSLRFSRRNLLFA+G LSK A
Sbjct: 632  GTPNRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKNA 671


>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
            isoform 1 [Vitis vinifera]
          Length = 667

 Score =  483 bits (1243), Expect = e-134
 Identities = 234/278 (84%), Positives = 247/278 (88%)
 Frame = +2

Query: 2    QGGNGTTTTEQLVGTDDGKRSYTLFQGHAGSVNSATFSPLGDFILSSSSDSTIRLWSTKL 181
            QG N    TEQ++GT  GKRSYTLFQGH+G V SATFSPLGDFILSSS+DSTIRLWSTKL
Sbjct: 390  QGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSSSADSTIRLWSTKL 449

Query: 182  NANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 361
            NANLVCYKGHNYPVWDVQFSP+GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ
Sbjct: 450  NANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 509

Query: 362  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 541
            WH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG+YMASGDEDGTIM
Sbjct: 510  WHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDGQYMASGDEDGTIM 569

Query: 542  MWDLSSGRCVTPLTGHTSCVWALDFXXXXXXXXXXXXDCTVKLWDVTASTKIPRAEENKA 721
            MWDLSSGRCV PL GH SCVW+L F            D TVKLWDVT STK+PR+EEN  
Sbjct: 570  MWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLLASGSADSTVKLWDVTTSTKVPRSEEN-- 627

Query: 722  GSTNRLRSLKTLPTKSTPVYSLRFSRRNLLFASGVLSK 835
            G+T+RLRSLKTLPTKSTPVYSLRFSRRNLLFA+G LSK
Sbjct: 628  GNTSRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSK 665


>ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1|
            predicted protein [Populus trichocarpa]
          Length = 675

 Score =  478 bits (1231), Expect = e-133
 Identities = 228/278 (82%), Positives = 246/278 (88%)
 Frame = +2

Query: 2    QGGNGTTTTEQLVGTDDGKRSYTLFQGHAGSVNSATFSPLGDFILSSSSDSTIRLWSTKL 181
            QG N T  +EQ    + GKRSYTLFQGH+G V+SATFSPLGDFILSSS+D+T+RLWSTKL
Sbjct: 396  QGENDTAPSEQGQSPNSGKRSYTLFQGHSGPVHSATFSPLGDFILSSSADTTVRLWSTKL 455

Query: 182  NANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQ 361
            NANLVCYKGHNYPVWDVQFSPVG YFAS+SHDRTARIWSMDRIQPLRIMAGHLSDVDC+Q
Sbjct: 456  NANLVCYKGHNYPVWDVQFSPVGQYFASASHDRTARIWSMDRIQPLRIMAGHLSDVDCLQ 515

Query: 362  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 541
            WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMAS DEDGTIM
Sbjct: 516  WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASADEDGTIM 575

Query: 542  MWDLSSGRCVTPLTGHTSCVWALDFXXXXXXXXXXXXDCTVKLWDVTASTKIPRAEENKA 721
            MWDLSSGRC++PL GH SCVW+L F            DCTVKLWDVT STK PR EE+K+
Sbjct: 576  MWDLSSGRCISPLIGHNSCVWSLAFSCEGSLLASGSADCTVKLWDVTTSTKAPRTEESKS 635

Query: 722  GSTNRLRSLKTLPTKSTPVYSLRFSRRNLLFASGVLSK 835
            G+TNRLR LKTLPTKSTPVY+LRFSRRNLLFA+G L+K
Sbjct: 636  GNTNRLRLLKTLPTKSTPVYTLRFSRRNLLFAAGALAK 673


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