BLASTX nr result

ID: Papaver23_contig00005792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005792
         (1608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   144   7e-32
ref|XP_002330007.1| global transcription factor group [Populus t...   142   3e-31
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   142   3e-31
ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...   141   4e-31
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...   141   4e-31

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  144 bits (363), Expect = 7e-32
 Identities = 113/295 (38%), Positives = 156/295 (52%), Gaps = 18/295 (6%)
 Frame = +3

Query: 462  DKLQMHDKRWV-VTLTDVAILPTVGETG---LGTLEAHVNGFVYSTCC-GRHVDFMHSNV 626
            +KLQ+   R+  + L+D+ I P+ G  G    G+LE+H NGF YST      VD M+ N+
Sbjct: 667  EKLQLAGTRFKPIRLSDLWIRPSFGGRGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNI 726

Query: 627  GDYFFGLGHWGT-PLLQFHLKHPIRVGNEVTEDVQFCL-----FQTPLEEVRFGKDSGNV 788
               FF         LL FHL + I VGN+ T+DVQF +      QT     R   D   +
Sbjct: 727  KHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEI 786

Query: 789  RKGKEARDSCR--DEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 950
             + +  RD     + + ++F+++V       QF  G  L F+    Q L E  F+G   K
Sbjct: 787  EEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFK-GLDLEFD----QPLRELGFHGVPHK 841

Query: 951  GGASAIFSLTYSALVVLEKTPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVLE 1127
              ASA    T S LV L +TPF V+ L ++EIVNL  +  G K  DMT+V++D+ R VL 
Sbjct: 842  --ASAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLR 899

Query: 1128 ICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 1292
            I SIP   L GIK  L+   +KYY +  + NW   ++ ITEDPEKF   GGW+ L
Sbjct: 900  IDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFL 954


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score =  142 bits (358), Expect = 3e-31
 Identities = 111/295 (37%), Positives = 156/295 (52%), Gaps = 18/295 (6%)
 Frame = +3

Query: 462  DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHVNGFVYSTC-CGRHVDFMHSNV 626
            +KLQ+   R+  + LTD+ I P  G  G    G+LEAHVNGF YST      VD M +N+
Sbjct: 663  EKLQLAGNRFKPIRLTDLWIRPVFGGRGRKLPGSLEAHVNGFRYSTSRAEERVDIMFANI 722

Query: 627  GDYFFGLGHWGT-PLLQFHLKHPIRVGNEVTEDVQFCL-----FQTPLEEVRFGKDSGNV 788
               FF         LL FHL + I VGN+ T+DVQF +      QT     R   D   +
Sbjct: 723  KHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEI 782

Query: 789  RKGKEARDSCR--DEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 950
             + +  R+     + + +SF+++V       QF+ G  L F+    Q L E  F+G   K
Sbjct: 783  EEEQRERERKNKINMDFQSFVNRVNDLWAQPQFS-GLDLEFD----QPLRELGFHGVPHK 837

Query: 951  GGASAIFSLTYSALVVLEKTPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVLE 1127
               ++    T S LV L +TPF VV L ++EIVNL  +  G K  DMT+V++D+ R VL 
Sbjct: 838  --VTSFIVPTSSCLVELVETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLR 895

Query: 1128 ICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 1292
            I SIP   L GIK  L+   +KYY +  + NW + ++ IT+DP+ F   GGW+ L
Sbjct: 896  IDSIPSTALDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFL 950


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1066

 Score =  142 bits (357), Expect = 3e-31
 Identities = 114/296 (38%), Positives = 159/296 (53%), Gaps = 19/296 (6%)
 Frame = +3

Query: 462  DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHVNGFVYSTC-CGRHVDFMHSNV 626
            +KLQ+ + R+  + L D+ I P  G  G    GTLEAHVNGF YST      VD M +N+
Sbjct: 665  EKLQLANNRFKPIRLPDLWIRPPFGGRGRKIPGTLEAHVNGFRYSTTRSDERVDVMFANI 724

Query: 627  GDYFFGLG-HWGTPLLQFHLKHPIRVGNEVTEDVQFCL-FQTPLEEVRFGKDSG------ 782
               FF    +    LL FHL + I VGN+ T+DVQF +     ++ V  GK S       
Sbjct: 725  KHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDEL 784

Query: 783  NVRKGKEARDSCRDEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 950
               + +  R +  + E +SF+++V       QF  G  L F+    Q L E  F G   K
Sbjct: 785  EEEQRERERKNKINVEFQSFVNRVNDLWGQPQFN-GLDLEFD----QPLRELGFPGVPHK 839

Query: 951  GGASAIFSLTYSA-LVVLEKTPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVL 1124
               S++F +  SA LV L +TPF VV L ++EIVNL  +  G K  DMT+V++D+ R VL
Sbjct: 840  ---SSVFIVPTSACLVELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVL 896

Query: 1125 EICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 1292
             I SIP   L GIK  L+   +KYY +  + NW + ++ IT+DP+ F   GGW+ L
Sbjct: 897  RIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFL 952


>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  141 bits (356), Expect = 4e-31
 Identities = 114/296 (38%), Positives = 159/296 (53%), Gaps = 19/296 (6%)
 Frame = +3

Query: 462  DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHVNGFVYSTCC-GRHVDFMHSNV 626
            +KLQ+ + R+  + L+D+ I P  G  G    GTLEAHVNGF YST      VD M  N+
Sbjct: 666  EKLQLANNRFKPIRLSDLWIRPAFGGRGRKIPGTLEAHVNGFRYSTTRQDERVDIMFGNI 725

Query: 627  GDYFFGLG-HWGTPLLQFHLKHPIRVGNEVTEDVQFCL-FQTPLEEVRFGKDSG------ 782
               FF    +    LL FHL + I VGN+ T+DVQF +     ++ V  GK S       
Sbjct: 726  KHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDEL 785

Query: 783  NVRKGKEARDSCRDEELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 950
               + +  R +  + E ++F+++V       QF  G  L F+    Q L E  F G   K
Sbjct: 786  EEEQRERQRKNKINVEFQTFVNRVNDLWGQPQFN-GFDLEFD----QPLRELGFPGVPHK 840

Query: 951  GGASAIFSLTYSA-LVVLEKTPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVL 1124
               S++F +  SA LV L +TPF VV L ++EIVNL  +  G K  DMTVV++D+ R VL
Sbjct: 841  ---SSVFIVPTSACLVELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVL 897

Query: 1125 EICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 1292
             I SIP   L GIK  L+   +KYY +  + NW + ++ IT+DP+ F   GGW+ L
Sbjct: 898  RIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFL 953


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score =  141 bits (356), Expect = 4e-31
 Identities = 115/296 (38%), Positives = 157/296 (53%), Gaps = 19/296 (6%)
 Frame = +3

Query: 462  DKLQMHDKRWV-VTLTDVAILPTVGETGL---GTLEAHVNGFVYSTCC-GRHVDFMHSNV 626
            +KLQ+ + R+  + L+D+ I P  G  G    GTLEAHVNGF YST      VD M  N+
Sbjct: 663  EKLQLANNRFKPIRLSDLWIRPAFGGRGRKIPGTLEAHVNGFRYSTTRQDERVDIMFGNI 722

Query: 627  GDYFFGLG-HWGTPLLQFHLKHPIRVGNEVTEDVQFCL-FQTPLEEVRFGKDSGNVRKGK 800
               FF    +    LL FHL + I VGN+ T+DVQF +     ++ V  GK S       
Sbjct: 723  KHSFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDEL 782

Query: 801  EARDSCRDE------ELKSFMHKVQ----VTQFTCGSALPFERVEFQALEEFKFNGDFPK 950
            E     RD       E ++F++++       QF  G  L F+    Q L E  F G   K
Sbjct: 783  EEEQRERDRKNKINVEFQTFVNRLNDLWGQPQFN-GLDLEFD----QPLRELGFPGVPHK 837

Query: 951  GGASAIFSLTYSA-LVVLEKTPFFVVPLRDLEIVNLT-MRHGTKKIDMTVVYEDYNRGVL 1124
               S++F +  SA LV L +TPF VV L ++EIVNL  +  G K  DMTVV++D+ R VL
Sbjct: 838  ---SSVFIVPTSACLVELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKDFKRDVL 894

Query: 1125 EICSIPLKFLTGIKHRLNLASVKYYVNSESRNWSKFVREITEDPEKFKASGGWDSL 1292
             I SIP   L GIK  L+   +KYY +  + NW + ++ IT+DP+ F   GGW+ L
Sbjct: 895  RIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGGWEFL 950


Top