BLASTX nr result

ID: Papaver23_contig00005665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005665
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|2...   281   5e-74
ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like ...   278   7e-73
ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus...   275   4e-72
ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2...   275   4e-72
ref|XP_003534321.1| PREDICTED: 60S ribosomal protein L13-2 isofo...   275   5e-72

>ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|222834090|gb|EEE72567.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  281 bits (720), Expect = 5e-74
 Identities = 137/169 (81%), Positives = 146/169 (86%)
 Frame = +3

Query: 105 MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHG 284
           MVKHNNV+PNGHFKKHWQNYVKTWFNQP                IFPRPT+GPLRP+VHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 285 QTLKYNMKVRAGRGFSLEELKSAGIPKKLAPTIGISVDHRRRNSSLEGLQTNVQRLRTYK 464
           QTLKYNMKVRAGRGFSLEELK+AGIPKKLAPTIGI+VDHRRRN SLEGLQTNVQRL+TYK
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYK 120

Query: 465 AKLVVFPRRAGKIKAGDSTPEELATATQVTGSFMPIVRERPAFDLVKVT 611
           AKLVVFPRRA K KAGDS PEELATATQV G FMPIVRE+P+ +LVKVT
Sbjct: 121 AKLVVFPRRARKSKAGDSAPEELATATQVQGHFMPIVREKPSVELVKVT 169


>ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like [Glycine max]
          Length = 207

 Score =  278 bits (710), Expect = 7e-73
 Identities = 134/169 (79%), Positives = 145/169 (85%)
 Frame = +3

Query: 105 MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHG 284
           MVKHNNVIPNGHF+KHWQNYVKTWFNQP                IFPRPT+GPLRP+VHG
Sbjct: 1   MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 285 QTLKYNMKVRAGRGFSLEELKSAGIPKKLAPTIGISVDHRRRNSSLEGLQTNVQRLRTYK 464
           QTLKYNMKVRAGRGFSLEELK+AGIPKKLAPTIGI+VDHRR+N SLE LQ NVQRL+TYK
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLESLQANVQRLKTYK 120

Query: 465 AKLVVFPRRAGKIKAGDSTPEELATATQVTGSFMPIVRERPAFDLVKVT 611
           AKLVVFPRRA K+KAGDSTPEELA ATQV GSF+PIVRE+P  +LVKVT
Sbjct: 121 AKLVVFPRRAQKVKAGDSTPEELANATQVQGSFLPIVREKPTVELVKVT 169


>ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223531254|gb|EEF33097.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  275 bits (704), Expect = 4e-72
 Identities = 132/169 (78%), Positives = 145/169 (85%)
 Frame = +3

Query: 105 MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHG 284
           MVKHNNV+PNGHFKKHWQNYVKTWFNQP                IFPRPT+GPLRP+VHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 285 QTLKYNMKVRAGRGFSLEELKSAGIPKKLAPTIGISVDHRRRNSSLEGLQTNVQRLRTYK 464
           QTLKYNMK+RAGRGF+LEELK+AGIPKKLAPTIGI+VDHRR+N SLEGLQ NVQRL+TYK
Sbjct: 61  QTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYK 120

Query: 465 AKLVVFPRRAGKIKAGDSTPEELATATQVTGSFMPIVRERPAFDLVKVT 611
           AKLVVFPRRA K KAGDS PEELATATQV G +MPIVRE+P+ +LVKVT
Sbjct: 121 AKLVVFPRRARKSKAGDSAPEELATATQVQGKYMPIVREKPSVELVKVT 169


>ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  275 bits (704), Expect = 4e-72
 Identities = 134/169 (79%), Positives = 142/169 (84%)
 Frame = +3

Query: 105 MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHG 284
           MVKHNNV+PNGHFKKHWQNYVKTWFNQP                IFPRPT+GPLRP+VHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 285 QTLKYNMKVRAGRGFSLEELKSAGIPKKLAPTIGISVDHRRRNSSLEGLQTNVQRLRTYK 464
           QTLKYNMKVRAGRGFSLEELK+AGIPKKLAPTIGI+VDHRRRN SLEGLQ NVQRL+TYK
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQANVQRLKTYK 120

Query: 465 AKLVVFPRRAGKIKAGDSTPEELATATQVTGSFMPIVRERPAFDLVKVT 611
           AKLVVFPRRA K KAGDS PEELATATQV G  MPIV E+P  +LVKVT
Sbjct: 121 AKLVVFPRRARKFKAGDSAPEELATATQVQGQIMPIVLEKPCVELVKVT 169


>ref|XP_003534321.1| PREDICTED: 60S ribosomal protein L13-2 isoform 1 [Glycine max]
           gi|356531513|ref|XP_003534322.1| PREDICTED: 60S
           ribosomal protein L13-2 isoform 2 [Glycine max]
          Length = 207

 Score =  275 bits (703), Expect = 5e-72
 Identities = 132/169 (78%), Positives = 144/169 (85%)
 Frame = +3

Query: 105 MVKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHG 284
           MVKHNNVIPNGHF+KHWQNYVKTWFNQP                IFPRPT+GPLRP+VHG
Sbjct: 1   MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 285 QTLKYNMKVRAGRGFSLEELKSAGIPKKLAPTIGISVDHRRRNSSLEGLQTNVQRLRTYK 464
           QTLKYNMKVR GRGFSLEELK+AGIPKKLAPTIGI+VDHRR+N SLE LQ NVQRL+TYK
Sbjct: 61  QTLKYNMKVRGGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLESLQANVQRLKTYK 120

Query: 465 AKLVVFPRRAGKIKAGDSTPEELATATQVTGSFMPIVRERPAFDLVKVT 611
           AKLVVFPRRA K+KAGDSTPEELA ATQV G+F+PIVRE+P  +LVKVT
Sbjct: 121 AKLVVFPRRAHKVKAGDSTPEELANATQVQGAFLPIVREKPTVELVKVT 169


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