BLASTX nr result

ID: Papaver23_contig00005660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005660
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Rici...   223   4e-56
ref|XP_002321601.1| predicted protein [Populus trichocarpa] gi|2...   223   5e-56
ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   222   1e-55
ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloro...   221   1e-55
gb|ABA40429.1| unknown [Solanum tuberosum]                            219   7e-55

>ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223550509|gb|EEF51996.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 193

 Score =  223 bits (569), Expect = 4e-56
 Identities = 115/167 (68%), Positives = 132/167 (79%)
 Frame = -3

Query: 921 FIHKYVPRDPKDKPKIYRYPASYDPYGPRSPLSDKIIQLAERMTALPPEELAQIGPTLRN 742
           F H +VPRDPK  P+ Y+YPA YDPYGPR P SDKI+QLAER+ ALPPEE  QIGPTL  
Sbjct: 28  FQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPSDKIVQLAERIAALPPEERRQIGPTLHY 87

Query: 741 KLQHPKMQRIDSECTDLGSQGGASAGSXXXXXXXXXKTTFDVKLEKFDAASKIKVIKEVR 562
           KL HPK+Q I +E  DLG+Q G+ A           KT FDVKLEKFDAA+KIKVIKEVR
Sbjct: 88  KLNHPKLQTISTEGMDLGAQ-GSQAAVAAKVEEKKEKTAFDVKLEKFDAAAKIKVIKEVR 146

Query: 561 AFTSLGLKEAKELVEKAPVIMKQGVTKEEADGIIEKLKAIGGVAVME 421
           AFT+LGLKEAK+LVEKAP ++KQGVTKEEA+ IIEK+KA GGVA+ME
Sbjct: 147 AFTNLGLKEAKDLVEKAPAVLKQGVTKEEANDIIEKIKAAGGVAIME 193


>ref|XP_002321601.1| predicted protein [Populus trichocarpa] gi|222868597|gb|EEF05728.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  223 bits (568), Expect = 5e-56
 Identities = 113/167 (67%), Positives = 132/167 (79%)
 Frame = -3

Query: 921 FIHKYVPRDPKDKPKIYRYPASYDPYGPRSPLSDKIIQLAERMTALPPEELAQIGPTLRN 742
           F H +VPRDPK KPK Y+YP  YDPYGPR P S+KII++AER+ ALPPEE +QIG  L  
Sbjct: 29  FQHDFVPRDPKTKPKKYKYPLYYDPYGPRPPPSEKIIEIAERIAALPPEERSQIGSALGY 88

Query: 741 KLQHPKMQRIDSECTDLGSQGGASAGSXXXXXXXXXKTTFDVKLEKFDAASKIKVIKEVR 562
           KL+HPK+Q I +E   LGSQGG +A           KT FDVKLEKFDAA+KIKVIKEVR
Sbjct: 89  KLKHPKLQPISTEGMGLGSQGGEAAAGAAKVEEKKEKTAFDVKLEKFDAAAKIKVIKEVR 148

Query: 561 AFTSLGLKEAKELVEKAPVIMKQGVTKEEADGIIEKLKAIGGVAVME 421
           AFT+LGLKEAK+LVEK P ++KQGVTK+EA+GIIEK+KA GGVAVME
Sbjct: 149 AFTNLGLKEAKDLVEKVPCVLKQGVTKDEANGIIEKIKAAGGVAVME 195


>ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12,
           chloroplastic-like [Cucumis sativus]
          Length = 193

 Score =  222 bits (565), Expect = 1e-55
 Identities = 114/163 (69%), Positives = 129/163 (79%)
 Frame = -3

Query: 909 YVPRDPKDKPKIYRYPASYDPYGPRSPLSDKIIQLAERMTALPPEELAQIGPTLRNKLQH 730
           + PRDP  KPK Y+YPA YDPYGPR P SDKII+LAER+ ALP  E  QIGPTL  KL+H
Sbjct: 32  FTPRDPNAKPKKYKYPAFYDPYGPRPPPSDKIIELAERIVALPAAERCQIGPTLXRKLRH 91

Query: 729 PKMQRIDSECTDLGSQGGASAGSXXXXXXXXXKTTFDVKLEKFDAASKIKVIKEVRAFTS 550
           PK+Q I  +  D+G +GGA+AGS          T FDVKLEKFDAASKIKVIKEVRAFT+
Sbjct: 92  PKLQEISVDGLDMGPEGGAAAGSSNVEEKKEK-TAFDVKLEKFDAASKIKVIKEVRAFTN 150

Query: 549 LGLKEAKELVEKAPVIMKQGVTKEEADGIIEKLKAIGGVAVME 421
           LGLKEAK+LVEK P I+KQGVTKEEA+GIIEK+KA GGVAVME
Sbjct: 151 LGLKEAKDLVEKVPAILKQGVTKEEANGIIEKIKAAGGVAVME 193


>ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 193

 Score =  221 bits (564), Expect = 1e-55
 Identities = 114/163 (69%), Positives = 129/163 (79%)
 Frame = -3

Query: 909 YVPRDPKDKPKIYRYPASYDPYGPRSPLSDKIIQLAERMTALPPEELAQIGPTLRNKLQH 730
           + PRDP  KPK Y+YPA YDPYGPR P SDKII+LAER+ ALP  E  QIGPTL  KL+H
Sbjct: 32  FTPRDPNAKPKKYKYPAFYDPYGPRPPPSDKIIELAERIVALPAAERCQIGPTLGEKLRH 91

Query: 729 PKMQRIDSECTDLGSQGGASAGSXXXXXXXXXKTTFDVKLEKFDAASKIKVIKEVRAFTS 550
           PK+Q I  +  D+G +GGA+AGS          T FDVKLEKFDAASKIKVIKEVRAFT+
Sbjct: 92  PKLQEISVDGLDMGPEGGAAAGSSNVEEKKEK-TAFDVKLEKFDAASKIKVIKEVRAFTN 150

Query: 549 LGLKEAKELVEKAPVIMKQGVTKEEADGIIEKLKAIGGVAVME 421
           LGLKEAK+LVEK P I+KQGVTKEEA+GIIEK+KA GGVAVME
Sbjct: 151 LGLKEAKDLVEKVPAILKQGVTKEEANGIIEKIKAAGGVAVME 193


>gb|ABA40429.1| unknown [Solanum tuberosum]
          Length = 194

 Score =  219 bits (558), Expect = 7e-55
 Identities = 113/163 (69%), Positives = 129/163 (79%)
 Frame = -3

Query: 909 YVPRDPKDKPKIYRYPASYDPYGPRSPLSDKIIQLAERMTALPPEELAQIGPTLRNKLQH 730
           +VPRDP  KP  Y+YPA+YDPYGPR P SDKI+QLAER+ AL PEE  QIGP LR  L+H
Sbjct: 32  FVPRDPNAKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILRH 91

Query: 729 PKMQRIDSECTDLGSQGGASAGSXXXXXXXXXKTTFDVKLEKFDAASKIKVIKEVRAFTS 550
           P +++I  E  DLG+ GGA  G          KT FDVKLEKFDAA+KIKVIKEVR+FTS
Sbjct: 92  PNLKQISVEGMDLGAIGGAGGGPAKAEEKKVEKTAFDVKLEKFDAAAKIKVIKEVRSFTS 151

Query: 549 LGLKEAKELVEKAPVIMKQGVTKEEADGIIEKLKAIGGVAVME 421
           LGLKEAKELVEKAP I+KQGVTKEEA+ IIEK+KA+GGVAVME
Sbjct: 152 LGLKEAKELVEKAPAILKQGVTKEEANEIIEKIKAVGGVAVME 194


Top