BLASTX nr result

ID: Papaver23_contig00005621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005621
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...   172   6e-41
ref|XP_004172985.1| PREDICTED: THO complex subunit 4-like, parti...   161   1e-37
ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucum...   161   1e-37
gb|AFW62224.1| hypothetical protein ZEAMMB73_911092 [Zea mays] g...   159   4e-37
gb|AFW62222.1| hypothetical protein ZEAMMB73_911092 [Zea mays]        159   4e-37

>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
           gi|296087136|emb|CBI33510.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score =  172 bits (436), Expect = 6e-41
 Identities = 97/178 (54%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
 Frame = +3

Query: 201 MATTLDMALDDIIKIXXXXXXXXXXXXXXXXXXXXXXXXXXVALNRGKAMRVASK-GSLK 377
           MAT+LDM+LDDIIK                            + N G+   +  + G L+
Sbjct: 1   MATSLDMSLDDIIKRSNSERVRGRGRARRGRGPIGG------SFNGGRMSGIPPRRGPLR 54

Query: 378 VKARPSGFKSTAKPSRTKGISLKPDLFEDSLVAAGYPGIETGTKLYVSNLDVGVTNEDIK 557
           V ARPS + + AK SR   I  + DLFEDSL AAG PG+E GTKLY+SNLD GVTNEDI+
Sbjct: 55  VNARPSSY-AIAKSSRRTKIPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIR 113

Query: 558 ELFSEIGSLKRYSVHYDMNGRPNGSAEVVFNRKADGLTAMKRYNNVQLDGKAMKIEII 731
           ELFSEIG +KRY+VHY+ NGRP+GSAEVV+ R++D   A+KRYNNV LDGK MKIEII
Sbjct: 114 ELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEII 171


>ref|XP_004172985.1| PREDICTED: THO complex subunit 4-like, partial [Cucumis sativus]
          Length = 368

 Score =  161 bits (407), Expect = 1e-37
 Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
 Frame = +3

Query: 201 MATTLDMALDDIIKIXXXXXXXXXXXXXXXXXXXXXXXXXXVALNRGKAMRVAS--KGSL 374
           M T LDM+L+D+IK                            + N G+ + + S  +G L
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGG-------SFNGGRGVVIGSVRRGPL 53

Query: 375 KVKARPSGFKSTAKPSRTKGISLKPDLFEDSLVAAGYPGIETGTKLYVSNLDVGVTNEDI 554
            + AR S +     P R K +  + DLFEDSL A+G  GI+ GTKLYVSNLD GVT EDI
Sbjct: 54  GINARASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDI 113

Query: 555 KELFSEIGSLKRYSVHYDMNGRPNGSAEVVFNRKADGLTAMKRYNNVQLDGKAMKIEII 731
           KELFSEIG +KR+++HYD NGRP+GSAEVV+ R++D   A+KRYNNV LDGK MKIE++
Sbjct: 114 KELFSEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEML 172


>ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
          Length = 286

 Score =  161 bits (407), Expect = 1e-37
 Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
 Frame = +3

Query: 201 MATTLDMALDDIIKIXXXXXXXXXXXXXXXXXXXXXXXXXXVALNRGKAMRVAS--KGSL 374
           M T LDM+L+D+IK                            + N G+ + + S  +G L
Sbjct: 1   MTTPLDMSLEDVIKKNNREKLRARGRARRGRGAGG-------SFNGGRGVVIGSVRRGPL 53

Query: 375 KVKARPSGFKSTAKPSRTKGISLKPDLFEDSLVAAGYPGIETGTKLYVSNLDVGVTNEDI 554
            + AR S +     P R K +  + DLFEDSL A+G  GI+ GTKLYVSNLD GVT EDI
Sbjct: 54  GINARASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDI 113

Query: 555 KELFSEIGSLKRYSVHYDMNGRPNGSAEVVFNRKADGLTAMKRYNNVQLDGKAMKIEII 731
           KELFSEIG +KR+++HYD NGRP+GSAEVV+ R++D   A+KRYNNV LDGK MKIE++
Sbjct: 114 KELFSEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEML 172


>gb|AFW62224.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
           gi|413922293|gb|AFW62225.1| hypothetical protein
           ZEAMMB73_911092 [Zea mays]
          Length = 272

 Score =  159 bits (403), Expect = 4e-37
 Identities = 80/126 (63%), Positives = 99/126 (78%)
 Frame = +3

Query: 354 VASKGSLKVKARPSGFKSTAKPSRTKGISLKPDLFEDSLVAAGYPGIETGTKLYVSNLDV 533
           +A +G L V +RPS        SRTK ++ +PDLF DS+ A+G   IETGTKLY+SNLD 
Sbjct: 33  LAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAASG---IETGTKLYISNLDY 89

Query: 534 GVTNEDIKELFSEIGSLKRYSVHYDMNGRPNGSAEVVFNRKADGLTAMKRYNNVQLDGKA 713
           GV+NEDIKELFSE+G LKR++VHYD  GRPNG+AEVVF R++D + A+KRYNNV LDGKA
Sbjct: 90  GVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKA 149

Query: 714 MKIEII 731
           MKIE+I
Sbjct: 150 MKIEVI 155


>gb|AFW62222.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
          Length = 184

 Score =  159 bits (403), Expect = 4e-37
 Identities = 80/126 (63%), Positives = 99/126 (78%)
 Frame = +3

Query: 354 VASKGSLKVKARPSGFKSTAKPSRTKGISLKPDLFEDSLVAAGYPGIETGTKLYVSNLDV 533
           +A +G L V +RPS        SRTK ++ +PDLF DS+ A+G   IETGTKLY+SNLD 
Sbjct: 33  LAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAASG---IETGTKLYISNLDY 89

Query: 534 GVTNEDIKELFSEIGSLKRYSVHYDMNGRPNGSAEVVFNRKADGLTAMKRYNNVQLDGKA 713
           GV+NEDIKELFSE+G LKR++VHYD  GRPNG+AEVVF R++D + A+KRYNNV LDGKA
Sbjct: 90  GVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKA 149

Query: 714 MKIEII 731
           MKIE+I
Sbjct: 150 MKIEVI 155


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