BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005604
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   174   3e-41
ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-a...   166   6e-39
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...   166   6e-39
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...   166   6e-39
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...   165   1e-38

>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  174 bits (441), Expect = 3e-41
 Identities = 96/159 (60%), Positives = 100/159 (62%), Gaps = 4/159 (2%)
 Frame = +3

Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKKNXXXXXXXXXX 302
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKKN          
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLG 69

Query: 303 XXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLSX 482
                   V+SMTVEGPPPPEES                      IPTAPL+QAQPGL+ 
Sbjct: 70  LVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLAG 129

Query: 483 XXXXXXXXXXXMMQPQINRP--PQLSAPAMNYP--PVIR 587
                      MMQPQI+RP  PQLSAP M YP  PVIR
Sbjct: 130 PVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIR 168


>ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Cucumis sativus]
           gi|449490639|ref|XP_004158663.1| PREDICTED: small
           nuclear ribonucleoprotein-associated protein B'-like
           [Cucumis sativus]
          Length = 284

 Score =  166 bits (421), Expect = 6e-39
 Identities = 95/160 (59%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
 Frame = +3

Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N         
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEERDERRTL 69

Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479
                    V+SMTVEGPPP EES                      IPTAPLVQAQPGL+
Sbjct: 70  GLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLVQAQPGLA 129

Query: 480 XXXXXXXXXXXXMMQPQINRP--PQLSAPAMNYP--PVIR 587
                       MMQPQI+RP  PQLSAP M YP  P+IR
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPIIR 169


>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|30685110|ref|NP_849414.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
           protein [Arabidopsis thaliana]
           gi|7268840|emb|CAB79044.1| putative snRNP protein
           [Arabidopsis thaliana] gi|28393634|gb|AAO42236.1|
           putative snRNP protein [Arabidopsis thaliana]
           gi|28827492|gb|AAO50590.1| putative snRNP protein
           [Arabidopsis thaliana] gi|222423490|dbj|BAH19715.1|
           AT4G20440 [Arabidopsis thaliana]
           gi|332658930|gb|AEE84330.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658931|gb|AEE84331.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658932|gb|AEE84332.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658933|gb|AEE84333.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana]
          Length = 257

 Score =  166 bits (421), Expect = 6e-39
 Identities = 90/153 (58%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
 Frame = +3

Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299
           LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N         
Sbjct: 10  LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69

Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479
                    V+SMTVEGPPPPEES                      +PT PLVQAQPGLS
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGLS 129

Query: 480 XXXXXXXXXXXXMMQPQINRPPQLSAPAMNYPP 578
                       MMQPQI+RPPQLSAP +  PP
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPP 162


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
           lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
           ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  166 bits (421), Expect = 6e-39
 Identities = 90/153 (58%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
 Frame = +3

Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299
           LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N         
Sbjct: 10  LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69

Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479
                    V+SMTVEGPPPPEES                      +PT PLVQAQPGLS
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGLS 129

Query: 480 XXXXXXXXXXXXMMQPQINRPPQLSAPAMNYPP 578
                       MMQPQI+RPPQLSAP +  PP
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPP 162


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530625|gb|EEF32501.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score =  165 bits (418), Expect = 1e-38
 Identities = 91/157 (57%), Positives = 98/157 (62%), Gaps = 3/157 (1%)
 Frame = +3

Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299
           LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N         
Sbjct: 10  LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479
                    V+SMTVEGPPP EES                      IPTAPL+QAQPGL+
Sbjct: 70  GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 480 XXXXXXXXXXXXMMQPQINRP--PQLSAPAMNYPPVI 584
                       MMQPQI+RP  PQLSAP M+YPP +
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYPPPV 166