BLASTX nr result
ID: Papaver23_contig00005604
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00005604 (989 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a... 174 3e-41 ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-a... 166 6e-39 ref|NP_193777.1| small nuclear ribonucleoprotein associated prot... 166 6e-39 ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab... 166 6e-39 ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p... 165 1e-38 >ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B' [Vitis vinifera] gi|147774905|emb|CAN61706.1| hypothetical protein VITISV_001610 [Vitis vinifera] Length = 276 Score = 174 bits (441), Expect = 3e-41 Identities = 96/159 (60%), Positives = 100/159 (62%), Gaps = 4/159 (2%) Frame = +3 Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKKNXXXXXXXXXX 302 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKKN Sbjct: 10 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLG 69 Query: 303 XXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLSX 482 V+SMTVEGPPPPEES IPTAPL+QAQPGL+ Sbjct: 70 LVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLAG 129 Query: 483 XXXXXXXXXXXMMQPQINRP--PQLSAPAMNYP--PVIR 587 MMQPQI+RP PQLSAP M YP PVIR Sbjct: 130 PVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVIR 168 >ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Cucumis sativus] gi|449490639|ref|XP_004158663.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Cucumis sativus] Length = 284 Score = 166 bits (421), Expect = 6e-39 Identities = 95/160 (59%), Positives = 99/160 (61%), Gaps = 5/160 (3%) Frame = +3 Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N Sbjct: 10 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEERDERRTL 69 Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479 V+SMTVEGPPP EES IPTAPLVQAQPGL+ Sbjct: 70 GLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLVQAQPGLA 129 Query: 480 XXXXXXXXXXXXMMQPQINRP--PQLSAPAMNYP--PVIR 587 MMQPQI+RP PQLSAP M YP P+IR Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPIIR 169 >ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] gi|30685110|ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] gi|79325195|ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] gi|238480869|ref|NP_001154258.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] gi|5262167|emb|CAB45810.1| putative snRNP protein [Arabidopsis thaliana] gi|7268840|emb|CAB79044.1| putative snRNP protein [Arabidopsis thaliana] gi|28393634|gb|AAO42236.1| putative snRNP protein [Arabidopsis thaliana] gi|28827492|gb|AAO50590.1| putative snRNP protein [Arabidopsis thaliana] gi|222423490|dbj|BAH19715.1| AT4G20440 [Arabidopsis thaliana] gi|332658930|gb|AEE84330.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] gi|332658931|gb|AEE84331.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] gi|332658932|gb|AEE84332.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] gi|332658933|gb|AEE84333.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] Length = 257 Score = 166 bits (421), Expect = 6e-39 Identities = 90/153 (58%), Positives = 95/153 (62%), Gaps = 1/153 (0%) Frame = +3 Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299 LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N Sbjct: 10 LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69 Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479 V+SMTVEGPPPPEES +PT PLVQAQPGLS Sbjct: 70 GLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGLS 129 Query: 480 XXXXXXXXXXXXMMQPQINRPPQLSAPAMNYPP 578 MMQPQI+RPPQLSAP + PP Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPP 162 >ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata] Length = 258 Score = 166 bits (421), Expect = 6e-39 Identities = 90/153 (58%), Positives = 95/153 (62%), Gaps = 1/153 (0%) Frame = +3 Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299 LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N Sbjct: 10 LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69 Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479 V+SMTVEGPPPPEES +PT PLVQAQPGLS Sbjct: 70 GLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGLS 129 Query: 480 XXXXXXXXXXXXMMQPQINRPPQLSAPAMNYPP 578 MMQPQI+RPPQLSAP + PP Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPP 162 >ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus communis] gi|223530625|gb|EEF32501.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus communis] Length = 275 Score = 165 bits (418), Expect = 1e-38 Identities = 91/157 (57%), Positives = 98/157 (62%), Gaps = 3/157 (1%) Frame = +3 Query: 123 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKK-NXXXXXXXXX 299 LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK N Sbjct: 10 LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69 Query: 300 XXXXXXXXXVVSMTVEGPPPPEESXXXXXXXXXXXXXXXXXXXXXXIPTAPLVQAQPGLS 479 V+SMTVEGPPP EES IPTAPL+QAQPGL+ Sbjct: 70 GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129 Query: 480 XXXXXXXXXXXXMMQPQINRP--PQLSAPAMNYPPVI 584 MMQPQI+RP PQLSAP M+YPP + Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYPPPV 166