BLASTX nr result

ID: Papaver23_contig00005575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005575
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   311   2e-82
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   310   4e-82
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   308   2e-81
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   295   1e-77
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   294   4e-77

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  311 bits (797), Expect = 2e-82
 Identities = 182/325 (56%), Positives = 208/325 (64%), Gaps = 4/325 (1%)
 Frame = -3

Query: 963  GDEDYGDEKIDRRQ----IQSSEPELYHVYPGRVARVMDTGCFVSLIGFKDKEGLVHVSQ 796
            G ED GD + DR +      S EPELY+VY GRV+RVMDTGCFV L   K KEGLVHVSQ
Sbjct: 194  GGEDGGDRRGDRDRRNGRYHSDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQ 253

Query: 795  MATRRVANAKEVVKRDQSVFVKVISLSGQKMSLSMRDVDQDTGKDLIPIKKTAEDELTRT 616
            +ATRRV NAK+VVKRDQ V+VKVIS+SGQK+SLSMRDVDQ+TG+DLIP+KK+ ED+  RT
Sbjct: 254  IATRRVGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRT 313

Query: 615  NPQGSNRGPNSKVGISGIRILEEDEETVXXXXXXXXXXXPEKWEAKQLIASGVLDASEFP 436
            NP G+N+GP S+ G+SGIRI+EE+ +             PEKWEAKQLIASGVLD  EFP
Sbjct: 314  NPSGANQGPVSRTGLSGIRIVEEN-DAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFP 372

Query: 435  NFDEDGEPGMLYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXX 256
             +D++G+ GMLYQ               EPAFLQGQSRYSMDMSPVKIFKNPEG      
Sbjct: 373  MYDDEGD-GMLYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEG------ 425

Query: 255  XXXXXLNEDEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXR 76
                  +    A LQ                               LIK          R
Sbjct: 426  ------SLSRAAALQS-----------------------------ALIKERREVREQQQR 450

Query: 75   TMLDSIPKDLNRPWEDPMPETGERH 1
            TMLDSIPKDLNRPWEDPMPETGERH
Sbjct: 451  TMLDSIPKDLNRPWEDPMPETGERH 475


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  310 bits (795), Expect = 4e-82
 Identities = 182/325 (56%), Positives = 207/325 (63%), Gaps = 4/325 (1%)
 Frame = -3

Query: 963  GDEDYGDEKIDRRQ----IQSSEPELYHVYPGRVARVMDTGCFVSLIGFKDKEGLVHVSQ 796
            G ED GD + DR +      S EPELY+VY GRV+RVMDTGCFV L   K KEGLVHVSQ
Sbjct: 206  GGEDGGDRRGDRDRRNGRYHSDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQ 265

Query: 795  MATRRVANAKEVVKRDQSVFVKVISLSGQKMSLSMRDVDQDTGKDLIPIKKTAEDELTRT 616
            +ATRRV NAK+VVKRDQ V+VKVIS+SGQK+SLSMRDVDQ+TG+DLIP+KK+ ED+  RT
Sbjct: 266  IATRRVGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRT 325

Query: 615  NPQGSNRGPNSKVGISGIRILEEDEETVXXXXXXXXXXXPEKWEAKQLIASGVLDASEFP 436
            NP G N+GP S+ G+SGIRI+EE+ +             PEKWEAKQLIASGVLD  EFP
Sbjct: 326  NPSGXNQGPVSRTGLSGIRIVEEN-DAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFP 384

Query: 435  NFDEDGEPGMLYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXX 256
             +D++G+ GMLYQ               EPAFLQGQSRYSMDMSPVKIFKNPEG      
Sbjct: 385  MYDDEGD-GMLYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEG------ 437

Query: 255  XXXXXLNEDEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXR 76
                  +    A LQ                               LIK          R
Sbjct: 438  ------SLSRAAALQS-----------------------------ALIKERREVREQQQR 462

Query: 75   TMLDSIPKDLNRPWEDPMPETGERH 1
            TMLDSIPKDLNRPWEDPMPETGERH
Sbjct: 463  TMLDSIPKDLNRPWEDPMPETGERH 487


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  308 bits (789), Expect = 2e-81
 Identities = 180/324 (55%), Positives = 207/324 (63%), Gaps = 4/324 (1%)
 Frame = -3

Query: 960  DEDYGDEKIDRRQ----IQSSEPELYHVYPGRVARVMDTGCFVSLIGFKDKEGLVHVSQM 793
            + D GD + DR +      S EPELY+VY GRV+RVMDTGCFV L   K KEGLVHVSQ+
Sbjct: 198  ERDGGDRRGDRDRRNGRYHSDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQI 257

Query: 792  ATRRVANAKEVVKRDQSVFVKVISLSGQKMSLSMRDVDQDTGKDLIPIKKTAEDELTRTN 613
            ATRRV NAK+VVKRDQ V+VKVIS+SGQK+SLSMRDVDQ+TG+DLIP+KK+ ED+  RTN
Sbjct: 258  ATRRVGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTN 317

Query: 612  PQGSNRGPNSKVGISGIRILEEDEETVXXXXXXXXXXXPEKWEAKQLIASGVLDASEFPN 433
            P G+N+GP S+ G+SGIRI+EE+ +             PEKWEAKQLIASGVLD  EFP 
Sbjct: 318  PSGANQGPVSRTGLSGIRIVEEN-DAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPM 376

Query: 432  FDEDGEPGMLYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXX 253
            +D++G+ GMLYQ               EPAFLQGQSRYSMDMSPVKIFKNPEG       
Sbjct: 377  YDDEGD-GMLYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEG------- 428

Query: 252  XXXXLNEDEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRT 73
                 +    A LQ                               LIK          RT
Sbjct: 429  -----SLSRAAALQS-----------------------------ALIKERREVREQQQRT 454

Query: 72   MLDSIPKDLNRPWEDPMPETGERH 1
            MLDSIPKDLNRPWEDPMPETGERH
Sbjct: 455  MLDSIPKDLNRPWEDPMPETGERH 478


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  295 bits (756), Expect = 1e-77
 Identities = 171/321 (53%), Positives = 205/321 (63%), Gaps = 2/321 (0%)
 Frame = -3

Query: 957  EDYGDEKIDRRQIQSSEPELYHVYPGRVARVMDTGCFVSLIGFKDKEGLVHVSQMATRRV 778
            E + + + +     SS+PELY VY GRV+RVMD+GCFV L  F+ KEGLVHVSQMATRR+
Sbjct: 203  ETHRETRRNNGSYTSSDPELYRVYKGRVSRVMDSGCFVQLNDFRGKEGLVHVSQMATRRI 262

Query: 777  ANAKEVVKRDQSVFVKVISLSGQKMSLSMRDVDQDTGKDLIPIKKTA--EDELTRTNPQG 604
            ANAK+VVKRDQ VFVKVIS+SGQK+SLSMRDVDQ++GKDL+P+KK++  +D+  RTNP G
Sbjct: 263  ANAKDVVKRDQDVFVKVISVSGQKLSLSMRDVDQNSGKDLLPLKKSSGDDDDSLRTNPSG 322

Query: 603  SNRGPNSKVGISGIRILEEDEETVXXXXXXXXXXXPEKWEAKQLIASGVLDASEFPNFDE 424
            S  GP ++ G+SGIRILEED + V           PE+WEAKQLIASGVL   E+P +D+
Sbjct: 323  SKEGPVTRTGLSGIRILEED-DAVPSRRPLKRMSSPERWEAKQLIASGVLGVQEYPMYDD 381

Query: 423  DGEPGMLYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXXXXX 244
            +G+ G+LYQ               EPAFLQGQ+RYS+DMSPVKIFKNPEG          
Sbjct: 382  EGD-GLLYQEGGAEEELEIELNEDEPAFLQGQTRYSVDMSPVKIFKNPEG---------- 430

Query: 243  XLNEDEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTMLD 64
              +    A LQ                               LIK          RTMLD
Sbjct: 431  --SLSRAAALQS-----------------------------ALIKERREVREQQQRTMLD 459

Query: 63   SIPKDLNRPWEDPMPETGERH 1
            SIPKDLNRPWEDPMPETGERH
Sbjct: 460  SIPKDLNRPWEDPMPETGERH 480


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1203

 Score =  294 bits (752), Expect = 4e-77
 Identities = 174/321 (54%), Positives = 203/321 (63%)
 Frame = -3

Query: 963  GDEDYGDEKIDRRQIQSSEPELYHVYPGRVARVMDTGCFVSLIGFKDKEGLVHVSQMATR 784
            GDED G+ K  R    S E ELY VY GR++RVM+TGCFV L  F+ KEGLVHVSQMATR
Sbjct: 232  GDED-GNRKGSRHG--SGELELYAVYKGRISRVMETGCFVQLDDFRGKEGLVHVSQMATR 288

Query: 783  RVANAKEVVKRDQSVFVKVISLSGQKMSLSMRDVDQDTGKDLIPIKKTAEDELTRTNPQG 604
            R+ NAK+VVKRDQ V+VKVIS+SGQK+SLSMRDVDQ TGKDL+P+KK++ED+  R NPQ 
Sbjct: 289  RITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDAMRMNPQD 348

Query: 603  SNRGPNSKVGISGIRILEEDEETVXXXXXXXXXXXPEKWEAKQLIASGVLDASEFPNFDE 424
            S  GP ++ G+SGIRI+EED +             PE+WEAKQLIASGVL  SE+P +D+
Sbjct: 349  SKGGPAARTGLSGIRIVEED-DAGSSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDD 407

Query: 423  DGEPGMLYQXXXXXXXXXXXXXXXEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXXXXX 244
            +G+ G+LYQ               EPAFLQGQSRYSMDMSPVKIFKNPEG          
Sbjct: 408  EGD-GLLYQEEGAEEELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEG---------- 456

Query: 243  XLNEDEPAFLQGQSRYSMDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTMLD 64
              +    A LQ                               LIK          RTMLD
Sbjct: 457  --SLGRAAALQS-----------------------------ALIKERREVREQQQRTMLD 485

Query: 63   SIPKDLNRPWEDPMPETGERH 1
            SIPKDLNRPWEDPMPE+GERH
Sbjct: 486  SIPKDLNRPWEDPMPESGERH 506


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