BLASTX nr result

ID: Papaver23_contig00005572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005572
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB16993.1| unknown [Solanum tuberosum]                            288   4e-76
ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [C...   287   9e-76
gb|AFK48775.1| unknown [Lotus japonicus]                              286   2e-75
ref|XP_002326333.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75
sp|P46297.1|RS23_FRAAN RecName: Full=40S ribosomal protein S23; ...   285   4e-75

>gb|ABB16993.1| unknown [Solanum tuberosum]
          Length = 142

 Score =  288 bits (738), Expect = 4e-76
 Identities = 142/142 (100%), Positives = 142/142 (100%)
 Frame = -1

Query: 531 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 352
           MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 172
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 171 VVKVSGVSLLALFKEKKEKPRS 106
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>ref|XP_004137806.1| PREDICTED: 40S ribosomal protein S23-like [Cucumis sativus]
           gi|449452122|ref|XP_004143809.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449463681|ref|XP_004149560.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449483351|ref|XP_004156564.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449508653|ref|XP_004163373.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
           gi|449521770|ref|XP_004167902.1| PREDICTED: 40S
           ribosomal protein S23-like [Cucumis sativus]
          Length = 142

 Score =  287 bits (735), Expect = 9e-76
 Identities = 141/142 (99%), Positives = 142/142 (100%)
 Frame = -1

Query: 531 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 352
           MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 172
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 171 VVKVSGVSLLALFKEKKEKPRS 106
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>gb|AFK48775.1| unknown [Lotus japonicus]
          Length = 142

 Score =  286 bits (732), Expect = 2e-75
 Identities = 141/142 (99%), Positives = 141/142 (99%)
 Frame = -1

Query: 531 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 352
           MGKTRGMGA RKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 172
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 171 VVKVSGVSLLALFKEKKEKPRS 106
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>ref|XP_002326333.1| predicted protein [Populus trichocarpa]
           gi|224098071|ref|XP_002311115.1| predicted protein
           [Populus trichocarpa] gi|224112945|ref|XP_002316341.1|
           predicted protein [Populus trichocarpa]
           gi|224140159|ref|XP_002323452.1| predicted protein
           [Populus trichocarpa] gi|118483731|gb|ABK93759.1|
           unknown [Populus trichocarpa]
           gi|118484067|gb|ABK93919.1| unknown [Populus
           trichocarpa] gi|118487579|gb|ABK95615.1| unknown
           [Populus trichocarpa] gi|222833526|gb|EEE72003.1|
           predicted protein [Populus trichocarpa]
           gi|222850935|gb|EEE88482.1| predicted protein [Populus
           trichocarpa] gi|222865381|gb|EEF02512.1| predicted
           protein [Populus trichocarpa]
           gi|222868082|gb|EEF05213.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  286 bits (731), Expect = 3e-75
 Identities = 141/142 (99%), Positives = 142/142 (100%)
 Frame = -1

Query: 531 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 352
           MGKTRGMGAGRKLKSHRRRQRWADKSYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 172
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 171 VVKVSGVSLLALFKEKKEKPRS 106
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


>sp|P46297.1|RS23_FRAAN RecName: Full=40S ribosomal protein S23; AltName: Full=S12
           gi|643074|gb|AAA79921.1| putative 40S ribosomal protein
           s12 [Fragaria x ananassa]
          Length = 142

 Score =  285 bits (729), Expect = 4e-75
 Identities = 140/142 (98%), Positives = 141/142 (99%)
 Frame = -1

Query: 531 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 352
           MGKTRGMGA RKLK+HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 351 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 172
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120

Query: 171 VVKVSGVSLLALFKEKKEKPRS 106
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142


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