BLASTX nr result

ID: Papaver23_contig00005548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005548
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase...   127   1e-27
gb|AAG61120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase a...   123   1e-26
ref|XP_002312110.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
gb|ABK96507.1| unknown [Populus trichocarpa x Populus deltoides]      122   2e-26
gb|ABK95205.1| unknown [Populus trichocarpa]                          122   2e-26

>ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic-like [Vitis vinifera]
           gi|297740331|emb|CBI30513.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  127 bits (318), Expect = 1e-27
 Identities = 74/136 (54%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
 Frame = +2

Query: 92  MAAAFSTVGAVNRAPXXXXXXXXXXXXXXXXX-----KKVNSSVA-PKPSSRSFKVVAAQ 253
           MAA  ST+GAVNRAP                      KKV+S +A P+ SS +FKVVA  
Sbjct: 1   MAATISTLGAVNRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVA-- 58

Query: 254 EVDPKKAQEVDPKKNSDKWAGLYYDQSDDQQDITRGKGMVDSLFQAPINTGTHNAIMSSY 433
           EVD +K      + + DKW GL +D+SDDQQDITRGKGMVDSLFQAP+++GTH A+MSSY
Sbjct: 59  EVDEEK------QTSKDKWKGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSY 112

Query: 434 EYASKGQRTYNFDNTM 481
           +Y S G R YN DNTM
Sbjct: 113 DYISTGLRQYNLDNTM 128


>gb|AAG61120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1
           [Gossypium hirsutum]
          Length = 438

 Score =  123 bits (309), Expect = 1e-26
 Identities = 72/137 (52%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
 Frame = +2

Query: 92  MAAAFSTVGAVNRAPXXXXXXXXXXXXXXXXX-----KKVNSSVAP--KPSSRSFKVVAA 250
           MAAA ST+GAVNRAP                      KKV++      K    SFK+VAA
Sbjct: 1   MAAAVSTIGAVNRAPLSLNGSGAGASAPSSAFMGNSLKKVSARFNNNGKAPVGSFKIVAA 60

Query: 251 QEVDPKKAQEVDPKKNSDKWAGLYYDQSDDQQDITRGKGMVDSLFQAPINTGTHNAIMSS 430
           +E+D       D + + D+W GL YD SDDQQDITRGKGMVDSLFQAP+N GTH A+MSS
Sbjct: 61  KEIDE------DTQTDQDRWKGLAYDISDDQQDITRGKGMVDSLFQAPMNDGTHYAVMSS 114

Query: 431 YEYASKGQRTYNFDNTM 481
           YEY S+G RTY+ DN M
Sbjct: 115 YEYISQGLRTYDLDNNM 131


>ref|XP_002312110.1| predicted protein [Populus trichocarpa] gi|222851930|gb|EEE89477.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  122 bits (307), Expect = 2e-26
 Identities = 76/137 (55%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
 Frame = +2

Query: 92  MAAAFSTVGAVNRAPXXXXXXXXXXXXXXXXX-----KKVNSS--VAPKPSSRSFKVVAA 250
           MAA  STVGAVNRAP                      KKV+SS     K SS SFKVVA 
Sbjct: 1   MAATISTVGAVNRAPLALNGSGAGSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVA- 59

Query: 251 QEVDPKKAQEVDPKKNSDKWAGLYYDQSDDQQDITRGKGMVDSLFQAPINTGTHNAIMSS 430
           +E D +K  E       D+W GL  D SDDQQDITRGKGMVDSLFQAP  TGTHN ++SS
Sbjct: 60  EEYDEEKQTE------KDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSS 113

Query: 431 YEYASKGQRTYNFDNTM 481
           YEY S+G RTYN DN M
Sbjct: 114 YEYLSQGLRTYNLDNMM 130


>gb|ABK96507.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 461

 Score =  122 bits (307), Expect = 2e-26
 Identities = 76/137 (55%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
 Frame = +2

Query: 92  MAAAFSTVGAVNRAPXXXXXXXXXXXXXXXXX-----KKVNSS--VAPKPSSRSFKVVAA 250
           MAA  STVGAVNRAP                      KKV+SS     K SS SFKVVA 
Sbjct: 1   MAATISTVGAVNRAPLALNGSGAGSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVA- 59

Query: 251 QEVDPKKAQEVDPKKNSDKWAGLYYDQSDDQQDITRGKGMVDSLFQAPINTGTHNAIMSS 430
           +E D +K  E       D+W GL  D SDDQQDITRGKGMVDSLFQAP  TGTHN ++SS
Sbjct: 60  EEYDEEKQTE------KDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSS 113

Query: 431 YEYASKGQRTYNFDNTM 481
           YEY S+G RTYN DN M
Sbjct: 114 YEYLSQGLRTYNLDNMM 130


>gb|ABK95205.1| unknown [Populus trichocarpa]
          Length = 475

 Score =  122 bits (307), Expect = 2e-26
 Identities = 76/137 (55%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
 Frame = +2

Query: 92  MAAAFSTVGAVNRAPXXXXXXXXXXXXXXXXX-----KKVNSS--VAPKPSSRSFKVVAA 250
           MAA  STVGAVNRAP                      KKV+SS     K SS SFKVVA 
Sbjct: 1   MAATISTVGAVNRAPLALNGSGAGSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVA- 59

Query: 251 QEVDPKKAQEVDPKKNSDKWAGLYYDQSDDQQDITRGKGMVDSLFQAPINTGTHNAIMSS 430
           +E D +K  E       D+W GL  D SDDQQDITRGKGMVDSLFQAP  TGTHN ++SS
Sbjct: 60  EEYDEEKQTE------KDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSS 113

Query: 431 YEYASKGQRTYNFDNTM 481
           YEY S+G RTYN DN M
Sbjct: 114 YEYLSQGLRTYNLDNMM 130


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