BLASTX nr result

ID: Papaver23_contig00005478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005478
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric...    60   4e-17
emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]    57   1e-16
ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243...    57   1e-16
emb|CBI20080.3| unnamed protein product [Vitis vinifera]               57   1e-16
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-16

>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
           gi|223550173|gb|EEF51660.1| tyrosyl-DNA
           phosphodiesterase, putative [Ricinus communis]
          Length = 1148

 Score = 60.1 bits (144), Expect(2) = 4e-17
 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 345 SSENLVSNKWNDVTNTVWCQDFPPRSEAD*SSLFTHFTDRDKS-*FKSEFSAQLA 506
           +S NLV N+W++VTNT+W QDFP RS  D SSLFT  +D + S   +S+F+AQLA
Sbjct: 557 TSANLVPNQWHNVTNTIWWQDFPRRSTPDLSSLFTRVSDGEISQDSRSDFAAQLA 611



 Score = 52.8 bits (125), Expect(2) = 4e-17
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +1

Query: 244 PEVIASGKDRQKQGIAFHHPK*LVLQREDNIRIVL 348
           PE IA G DR++QGIA HHPK LVLQRE++IR+++
Sbjct: 522 PEAIAFGNDRRRQGIACHHPKLLVLQRENSIRVII 556


>emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]
          Length = 1423

 Score = 57.4 bits (137), Expect(2) = 1e-16
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +3

Query: 345 SSENLVSNKWNDVTNTVWCQDFPPRSEAD*SSLFTHFTDRD-KS*FKSEFSAQLA 506
           +S NLV+ +WN VTNTVW QDFP  S  D SS+FT F D +     +S+F+AQLA
Sbjct: 505 TSANLVAKQWNSVTNTVWWQDFPRISPPDYSSIFTQFCDGEINLDSRSDFAAQLA 559



 Score = 53.9 bits (128), Expect(2) = 1e-16
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +1

Query: 244 PEVIASGKDRQKQGIAFHHPK*LVLQREDNIRIVL 348
           PE IA G+DR+K G+A HHPK LVLQRED+IRI++
Sbjct: 470 PEAIAFGRDRKKLGVACHHPKLLVLQREDSIRIII 504


>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
          Length = 1091

 Score = 57.4 bits (137), Expect(2) = 1e-16
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +3

Query: 345 SSENLVSNKWNDVTNTVWCQDFPPRSEAD*SSLFTHFTDRD-KS*FKSEFSAQLA 506
           +S NLV+ +WN VTNTVW QDFP  S  D SS+FT F D +     +S+F+AQLA
Sbjct: 501 TSANLVAKQWNSVTNTVWWQDFPRISPPDYSSIFTQFCDGEINLDSRSDFAAQLA 555



 Score = 53.9 bits (128), Expect(2) = 1e-16
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +1

Query: 244 PEVIASGKDRQKQGIAFHHPK*LVLQREDNIRIVL 348
           PE IA G+DR+K G+A HHPK LVLQRED+IRI++
Sbjct: 466 PEAIAFGRDRKKLGVACHHPKLLVLQREDSIRIII 500


>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 57.4 bits (137), Expect(2) = 1e-16
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +3

Query: 345 SSENLVSNKWNDVTNTVWCQDFPPRSEAD*SSLFTHFTDRD-KS*FKSEFSAQLA 506
           +S NLV+ +WN VTNTVW QDFP  S  D SS+FT F D +     +S+F+AQLA
Sbjct: 461 TSANLVAKQWNSVTNTVWWQDFPRISPPDYSSIFTQFCDGEINLDSRSDFAAQLA 515



 Score = 53.9 bits (128), Expect(2) = 1e-16
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +1

Query: 244 PEVIASGKDRQKQGIAFHHPK*LVLQREDNIRIVL 348
           PE IA G+DR+K G+A HHPK LVLQRED+IRI++
Sbjct: 426 PEAIAFGRDRKKLGVACHHPKLLVLQREDSIRIII 460


>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
           predicted protein [Populus trichocarpa]
          Length = 1131

 Score = 56.6 bits (135), Expect(2) = 4e-16
 Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
 Frame = +3

Query: 345 SSENLVSN------KWNDVTNTVWCQDFPPRSEAD*SSLFTHFTDRD-KS*FKSEFSAQL 503
           +S NLVSN      KWN+VTNTVW QDFP RS  D S LF   +D D     +S+F+AQL
Sbjct: 555 TSANLVSNQVVAHSKWNNVTNTVWWQDFPARSAPDPSPLFIRVSDGDANKDSRSDFAAQL 614

Query: 504 A 506
           A
Sbjct: 615 A 615



 Score = 52.8 bits (125), Expect(2) = 4e-16
 Identities = 23/35 (65%), Positives = 31/35 (88%)
 Frame = +1

Query: 244 PEVIASGKDRQKQGIAFHHPK*LVLQREDNIRIVL 348
           PE IA G+DR+++GIA HHPK LVLQRED+IR+++
Sbjct: 520 PESIAFGQDRKRRGIACHHPKLLVLQREDSIRVII 554


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