BLASTX nr result

ID: Papaver23_contig00005351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005351
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula] ...   250   4e-64
gb|AFK42365.1| unknown [Medicago truncatula]                          249   1e-63
ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|2...   246   7e-63
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl...   245   2e-62
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]      245   2e-62

>ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
           gi|355488100|gb|AES69303.1| 30S ribosomal protein
           [Medicago truncatula]
          Length = 235

 Score =  250 bits (639), Expect = 4e-64
 Identities = 131/180 (72%), Positives = 142/180 (78%)
 Frame = -3

Query: 744 SPSARKLYVGNIPRTVNNEELEKLFAEHGAVEKVEVMYDKYSKRSRRFAFVTMKTSEDVA 565
           SP+ RKLYVGNIPRTV+N+ELEK+  EHGAVEK EVMYDKYSKRSRRFAFVTMKT ED  
Sbjct: 56  SPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDAN 115

Query: 564 AAIEKMNESEIGGRQIKVNVTEKPLDTTDSPLQAAESKFIDSPYKVYVGNLAKTVTSDIL 385
           AA EK+N +EIGGR+IKVN+TEKPL T   P+QA ES F+DSPYKVYVGNLAK VTSD L
Sbjct: 116 AAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSL 175

Query: 384 SKIFSEKGQVLSAKVSTVPXXXXXXXXXXXXXXSDEDVETAISSFNDALLEGQKIRVNKA 205
            K FSEKG  LSAKVS  P              SDEDVE AISSFN+ALLEGQKIRVNKA
Sbjct: 176 KKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNKA 235


>gb|AFK42365.1| unknown [Medicago truncatula]
          Length = 235

 Score =  249 bits (635), Expect = 1e-63
 Identities = 130/179 (72%), Positives = 141/179 (78%)
 Frame = -3

Query: 744 SPSARKLYVGNIPRTVNNEELEKLFAEHGAVEKVEVMYDKYSKRSRRFAFVTMKTSEDVA 565
           SP+ RKLYVGNIPRTV+N+ELEK+  EHGAVEK EVMYDKYSKRSRRFAFVTMKT ED  
Sbjct: 56  SPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDAN 115

Query: 564 AAIEKMNESEIGGRQIKVNVTEKPLDTTDSPLQAAESKFIDSPYKVYVGNLAKTVTSDIL 385
           AA EK+N +EIGGR+IKVN+TEKPL T   P+QA ES F+DSPYKVYVGNLAK VTSD L
Sbjct: 116 AAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSL 175

Query: 384 SKIFSEKGQVLSAKVSTVPXXXXXXXXXXXXXXSDEDVETAISSFNDALLEGQKIRVNK 208
            K FSEKG  LSAKVS  P              SDEDVE AISSFN+ALLEGQKIRVNK
Sbjct: 176 KKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNK 234


>ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|222850427|gb|EEE87974.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  246 bits (628), Expect = 7e-63
 Identities = 134/199 (67%), Positives = 154/199 (77%), Gaps = 2/199 (1%)
 Frame = -3

Query: 795 RVSAVAEET-DVSTQDNSSPSARKLYVGNIPRTVNNEELEKLFAEHGAVEKVEVMYDKYS 619
           R+ AVAEET   +  D SS +AR+LYVGNIPRT+ NEEL K+  EHGAVEK EVMYDKYS
Sbjct: 57  RLFAVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYS 116

Query: 618 KRSRRFAFVTMKTSEDVAAAIEKMNESEIGGRQIKVNVTEKPLDTTDSP-LQAAESKFID 442
            RSRRFAFVTMKT+ED  AAIEK+N +EIGGR+IKVN+TEKPL + D P LQ+ ES+F+D
Sbjct: 117 GRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDESQFVD 176

Query: 441 SPYKVYVGNLAKTVTSDILSKIFSEKGQVLSAKVSTVPXXXXXXXXXXXXXXSDEDVETA 262
           SPYKVYVGNLAKTV +D L   FS+KG VLSAKVS VP              S+EDVE A
Sbjct: 177 SPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVA 236

Query: 261 ISSFNDALLEGQKIRVNKA 205
           ISSFN++LLEGQ IRVNKA
Sbjct: 237 ISSFNNSLLEGQPIRVNKA 255


>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  245 bits (625), Expect = 2e-62
 Identities = 134/196 (68%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
 Frame = -3

Query: 789 SAVAEETDVSTQDNSSPSARKLYVGNIPRTVNNEELEKLFAEHGAVEKVEVMYDKYSKRS 610
           +AVAE+   +T+     SAR+LYVGNIPRTV NEEL K+  EHGAVEK EVMYDKYS RS
Sbjct: 55  AAVAEQAATATE----ASARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRS 110

Query: 609 RRFAFVTMKTSEDVAAAIEKMNESEIGGRQIKVNVTEKPLDTTDSP-LQAAESKFIDSPY 433
           RRFAFVTMKT ED  A IEK+N +EIGGR++KVNVTEKPL T D P LQA ES+FIDSP+
Sbjct: 111 RRFAFVTMKTVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSPH 170

Query: 432 KVYVGNLAKTVTSDILSKIFSEKGQVLSAKVSTVPXXXXXXXXXXXXXXSDEDVETAISS 253
           KVYVGNLAKTVT+D L   FSEKG+VLSAKVS VP              S+EDVE AISS
Sbjct: 171 KVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISS 230

Query: 252 FNDALLEGQKIRVNKA 205
           FN++LLEGQ IRVNKA
Sbjct: 231 FNNSLLEGQTIRVNKA 246


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  245 bits (625), Expect = 2e-62
 Identities = 133/199 (66%), Positives = 154/199 (77%), Gaps = 2/199 (1%)
 Frame = -3

Query: 795 RVSAVAEET-DVSTQDNSSPSARKLYVGNIPRTVNNEELEKLFAEHGAVEKVEVMYDKYS 619
           R+ AVAEET   +  D SS +AR+LYVGNIPRT+ NEEL K+  EHGAVEK EVMYDKYS
Sbjct: 57  RLFAVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYS 116

Query: 618 KRSRRFAFVTMKTSEDVAAAIEKMNESEIGGRQIKVNVTEKPLDTTDSP-LQAAESKFID 442
            RSRRFAFVTMKT+ED  AAIEK+N +EIGGR+IKVN+TEKPL + D P LQ+ E++F+D
Sbjct: 117 GRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDETQFVD 176

Query: 441 SPYKVYVGNLAKTVTSDILSKIFSEKGQVLSAKVSTVPXXXXXXXXXXXXXXSDEDVETA 262
           SPYKVYVGNLAKTV +D L   FS+KG VLSAKVS VP              S+EDVE A
Sbjct: 177 SPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVA 236

Query: 261 ISSFNDALLEGQKIRVNKA 205
           ISSFN++LLEGQ IRVNKA
Sbjct: 237 ISSFNNSLLEGQPIRVNKA 255


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