BLASTX nr result
ID: Papaver23_contig00005343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00005343
(954 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase 53 [Arabido... 243 5e-72
ref|XP_002883355.1| hypothetical protein ARALYDRAFT_479746 [Arab... 242 1e-71
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 239 2e-71
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera] 239 2e-71
emb|CBI31778.3| unnamed protein product [Vitis vinifera] 239 2e-71
>ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase 53 [Arabidopsis thaliana]
gi|75335516|sp|Q9LUW5.1|RH53_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 53
gi|9293867|dbj|BAB01770.1| DEAD-Box RNA helicase-like
protein [Arabidopsis thaliana]
gi|17064852|gb|AAL32580.1| DEAD-Box RNA helicase-like
protein [Arabidopsis thaliana]
gi|20259816|gb|AAM13255.1| DEAD-Box RNA helicase-like
protein [Arabidopsis thaliana]
gi|332643101|gb|AEE76622.1| DEAD-box ATP-dependent RNA
helicase 53 [Arabidopsis thaliana]
Length = 616
Score = 243 bits (621), Expect(2) = 5e-72
Identities = 118/142 (83%), Positives = 132/142 (92%)
Frame = -1
Query: 954 EDVETILQKLPKKRQSMMFSATMPPWIRKLTQKYLKDPLTVDLVGDSDQKLADGITLYSI 775
EDVE IL+KLP+KRQSMMFSATMP WIR LT+KYL +PLTVDLVGDSDQKLADGIT YSI
Sbjct: 269 EDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSI 328
Query: 774 VADTYGKASIIAPLITEHAKGGKTIVFTQTKRDADRLAYSMGRTLKCEALHGDISQNQRE 595
+AD+YG+ASII PL+TEHAKGGK IVFTQTKRDADRL+Y++ R+ KCEALHGDISQ+QRE
Sbjct: 329 IADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRE 388
Query: 594 RTLAGFRDGSFNVLVATDVAAR 529
RTLAGFRDG FN+LVATDVAAR
Sbjct: 389 RTLAGFRDGHFNILVATDVAAR 410
Score = 55.1 bits (131), Expect(2) = 5e-72
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 412 RAGKKGSAILIHSDQQTRAVRGIERDVGGKFKELPKIA 299
RAGKKGSAILI+S Q+RAV+ IER+VG +F ELP IA
Sbjct: 441 RAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIA 478
>ref|XP_002883355.1| hypothetical protein ARALYDRAFT_479746 [Arabidopsis lyrata subsp.
lyrata] gi|297329195|gb|EFH59614.1| hypothetical protein
ARALYDRAFT_479746 [Arabidopsis lyrata subsp. lyrata]
Length = 612
Score = 242 bits (618), Expect(2) = 1e-71
Identities = 117/142 (82%), Positives = 132/142 (92%)
Frame = -1
Query: 954 EDVETILQKLPKKRQSMMFSATMPPWIRKLTQKYLKDPLTVDLVGDSDQKLADGITLYSI 775
EDVE IL+KLP+KRQSMMFSATMP WIR LT+KYL +PLT+DLVGDSDQKLADGIT YSI
Sbjct: 266 EDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITTYSI 325
Query: 774 VADTYGKASIIAPLITEHAKGGKTIVFTQTKRDADRLAYSMGRTLKCEALHGDISQNQRE 595
+AD+YG+ASII PL+TEHAKGGK IVFTQTKRDADRL+Y++ R+ KCEALHGDISQ+QRE
Sbjct: 326 LADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRE 385
Query: 594 RTLAGFRDGSFNVLVATDVAAR 529
RTLAGFRDG FN+LVATDVAAR
Sbjct: 386 RTLAGFRDGHFNILVATDVAAR 407
Score = 55.1 bits (131), Expect(2) = 1e-71
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 412 RAGKKGSAILIHSDQQTRAVRGIERDVGGKFKELPKIA 299
RAGKKGSAILI+S Q+RAV+ IER+VG +F ELP IA
Sbjct: 438 RAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELPSIA 475
>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
vinifera]
Length = 666
Score = 239 bits (609), Expect(2) = 2e-71
Identities = 117/142 (82%), Positives = 130/142 (91%)
Frame = -1
Query: 954 EDVETILQKLPKKRQSMMFSATMPPWIRKLTQKYLKDPLTVDLVGDSDQKLADGITLYSI 775
EDVE IL+KLP+ RQSMMFSATMP WIRKLTQKYLK+PLT+DLVGDSDQKLA+GI+LYSI
Sbjct: 280 EDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSI 339
Query: 774 VADTYGKASIIAPLITEHAKGGKTIVFTQTKRDADRLAYSMGRTLKCEALHGDISQNQRE 595
++ Y KASI+ PLITEHAKGGK IVFTQTKRDADRLAY+M R +CEALHGDISQ+QRE
Sbjct: 340 ASEMYEKASIVGPLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRE 399
Query: 594 RTLAGFRDGSFNVLVATDVAAR 529
RTL+GFRDG FNVLVATDVAAR
Sbjct: 400 RTLSGFRDGHFNVLVATDVAAR 421
Score = 57.4 bits (137), Expect(2) = 2e-71
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -3
Query: 412 RAGKKGSAILIHSDQQTRAVRGIERDVGGKFKELPKIA 299
RAGKKG+AILI+++QQ R VR IERD+G KF ELP+IA
Sbjct: 452 RAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPRIA 489
>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
Length = 666
Score = 239 bits (609), Expect(2) = 2e-71
Identities = 117/142 (82%), Positives = 130/142 (91%)
Frame = -1
Query: 954 EDVETILQKLPKKRQSMMFSATMPPWIRKLTQKYLKDPLTVDLVGDSDQKLADGITLYSI 775
EDVE IL+KLP+ RQSMMFSATMP WIRKLTQKYLK+PLT+DLVGDSDQKLA+GI+LYSI
Sbjct: 280 EDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSI 339
Query: 774 VADTYGKASIIAPLITEHAKGGKTIVFTQTKRDADRLAYSMGRTLKCEALHGDISQNQRE 595
++ Y KASI+ PLITEHAKGGK IVFTQTKRDADRLAY+M R +CEALHGDISQ+QRE
Sbjct: 340 ASEMYEKASIVGPLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRE 399
Query: 594 RTLAGFRDGSFNVLVATDVAAR 529
RTL+GFRDG FNVLVATDVAAR
Sbjct: 400 RTLSGFRDGHFNVLVATDVAAR 421
Score = 57.4 bits (137), Expect(2) = 2e-71
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -3
Query: 412 RAGKKGSAILIHSDQQTRAVRGIERDVGGKFKELPKIA 299
RAGKKG+AILI+++QQ R VR IERD+G KF ELP+IA
Sbjct: 452 RAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPRIA 489
>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 239 bits (609), Expect(2) = 2e-71
Identities = 117/142 (82%), Positives = 130/142 (91%)
Frame = -1
Query: 954 EDVETILQKLPKKRQSMMFSATMPPWIRKLTQKYLKDPLTVDLVGDSDQKLADGITLYSI 775
EDVE IL+KLP+ RQSMMFSATMP WIRKLTQKYLK+PLT+DLVGDSDQKLA+GI+LYSI
Sbjct: 280 EDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSI 339
Query: 774 VADTYGKASIIAPLITEHAKGGKTIVFTQTKRDADRLAYSMGRTLKCEALHGDISQNQRE 595
++ Y KASI+ PLITEHAKGGK IVFTQTKRDADRLAY+M R +CEALHGDISQ+QRE
Sbjct: 340 ASEMYEKASIVGPLITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRE 399
Query: 594 RTLAGFRDGSFNVLVATDVAAR 529
RTL+GFRDG FNVLVATDVAAR
Sbjct: 400 RTLSGFRDGHFNVLVATDVAAR 421
Score = 57.4 bits (137), Expect(2) = 2e-71
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -3
Query: 412 RAGKKGSAILIHSDQQTRAVRGIERDVGGKFKELPKIA 299
RAGKKG+AILI+++QQ R VR IERD+G KF ELP+IA
Sbjct: 452 RAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPRIA 489