BLASTX nr result

ID: Papaver23_contig00005276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005276
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...    91   4e-16
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...    89   4e-16
emb|CBI39650.3| unnamed protein product [Vitis vinifera]               86   2e-14
ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinu...    85   3e-14
emb|CBI39651.3| unnamed protein product [Vitis vinifera]               85   3e-14

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 70/203 (34%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
 Frame = -1

Query: 1055 GFYYATSSPNFCFSFFYADVERSFFRLGDEKTRPLLHFHFHEGIKVGTEKRRDIQF---- 888
            GF Y+TS P+      Y +++ +FF+  +++   LLHFH H  I VG +K +D+QF    
Sbjct: 707  GFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFFVEV 766

Query: 887  -RLVQTPVGQKRSL-------------DDSYKINEDLKNFVHNVGEKWRGIPVLECFPFV 750
              +VQT  G KRS              D   KIN D +NFV+ V + W G P  +     
Sbjct: 767  MDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLW-GQPQFKGLDLE 825

Query: 749  DAEVRKACEFQGSCPSGAPTVFGLTSFALVGLVAEPFIVVNLYKIRGVHXXXXXXXXXXL 570
              +  +   F G  P  A      TS  LV L+  PF+V+ L +I  V+           
Sbjct: 826  FDQPLRELGFHG-VPHKASAFIVPTSSCLVELIETPFLVITLSEIEIVN-LERVGLGQKN 883

Query: 569  VDMTIVFEDFKFKPDQVRINSKP 501
             DMTIVF+D  FK D +RI+S P
Sbjct: 884  FDMTIVFKD--FKRDVLRIDSIP 904


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score = 88.6 bits (218), Expect(2) = 4e-16
 Identities = 69/203 (33%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
 Frame = -1

Query: 1055 GFYYATSSPNFCFSFFYADVERSFFRLGDEKTRPLLHFHFHEGIKVGTEKRRDIQF---- 888
            G  Y+TS P+      Y++++ +FF+  D++   LLHFH H  I VG +K +D+QF    
Sbjct: 704  GLRYSTSRPDERIDVMYSNIKHAFFQPADKEMITLLHFHLHNHIMVGNKKTKDVQFFIEV 763

Query: 887  -RLVQTPVGQKRSL-------------DDSYKINEDLKNFVHNVGEKWRGIPVLECFPFV 750
              +VQT  G KRS              D   KIN D +NFV+ V + W G P        
Sbjct: 764  MDIVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDVW-GQPQFRGLDLE 822

Query: 749  DAEVRKACEFQGSCPSGAPTVFGLTSFALVGLVAEPFIVVNLYKIRGVHXXXXXXXXXXL 570
              +  +   F G  P  A      TS  LV L+  P +V+ L +I  V+           
Sbjct: 823  FDQPLRELGFHG-VPHKASAFIVPTSSCLVELIETPVVVITLSEIEIVN-LERIGLGQKN 880

Query: 569  VDMTIVFEDFKFKPDQVRINSKP 501
             DMTIVF+D  FK D +RI+S P
Sbjct: 881  FDMTIVFKD--FKRDVLRIDSIP 901



 Score = 23.1 bits (48), Expect(2) = 4e-16
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = -2

Query: 451  KKSFNLAGVKYYEN--EINWHALLEGYRGRDGDSYCGPNGEAYIENYYS---SERERDAY 287
            K+  N   +KYYE+   +NW  +L+     D + +    G  ++    S   SE   D+ 
Sbjct: 909  KEWLNTTDLKYYESRLNLNWRPILKTITD-DPEKFIEDGGWEFLNMEVSDSDSENSADSD 967

Query: 286  CGREESGVLVGAGPE 242
             G   S V   +G E
Sbjct: 968  HGYVPSDVQSDSGSE 982


>emb|CBI39650.3| unnamed protein product [Vitis vinifera]
          Length = 721

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 58/173 (33%), Positives = 85/173 (49%)
 Frame = -1

Query: 1055 GFYYATSSPNFCFSFFYADVERSFFRLGDEKTRPLLHFHFHEGIKVGTEKRRDIQFRLVQ 876
            GF Y+TS P+      Y +++ +FF+  +++   LLHFH H  I VG +K +D+QF +  
Sbjct: 421  GFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFFV-- 478

Query: 875  TPVGQKRSLDDSYKINEDLKNFVHNVGEKWRGIPVLECFPFVDAEVRKACEFQGSCPSGA 696
                +    D   KIN D +NFV+ V + W G P  +       +  +   F G  P  A
Sbjct: 479  ----EVMDRDRKNKINMDFQNFVNRVNDLW-GQPQFKGLDLEFDQPLRELGFHG-VPHKA 532

Query: 695  PTVFGLTSFALVGLVAEPFIVVNLYKIRGVHXXXXXXXXXXLVDMTIVFEDFK 537
                  TS  LV L+  PF+V+ L +I  V+            DMTIVF+DFK
Sbjct: 533  SAFIVPTSSCLVELIETPFLVITLSEIEIVN-LERVGLGQKNFDMTIVFKDFK 584


>ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223526847|gb|EEF29061.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1050

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
 Frame = -1

Query: 1055 GFYYATSSPNFCFSFFYADVERSFFRLGDEKTRPLLHFHFHEGIKVGTEKRRDIQFRL-- 882
            GF +ATS P+      +A+++ +FF+  + +   LLHFH H  I VG +K +D+QF +  
Sbjct: 689  GFLFATSRPDEKVEVMFANIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYVEV 748

Query: 881  ---VQTPVGQKRSL-------------DDSYKINEDLKNFVHNVGEKWRGIPVLECFPFV 750
               VQT  G KRS              D   KIN D ++FV+ V + W        F  +
Sbjct: 749  MESVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWS----QSQFSGL 804

Query: 749  DAEVRKACEFQG--SCPSGAPTVFGLTSFALVGLVAEPFIVVNLYKIRGVHXXXXXXXXX 576
            D E  +     G    P    +    TS  LV L+  PF+VV L +I  V+         
Sbjct: 805  DLEFDQPLRELGFHGVPYKTSSFIVPTSSCLVELIETPFLVVTLSEIEIVN-LERVGLGQ 863

Query: 575  XLVDMTIVFEDFKFKPDQVRINSKP 501
               DMTIVF+D  FK D +RI+S P
Sbjct: 864  KNFDMTIVFKD--FKRDVLRIDSIP 886


>emb|CBI39651.3| unnamed protein product [Vitis vinifera]
          Length = 977

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 60/185 (32%), Positives = 91/185 (49%)
 Frame = -1

Query: 1055 GFYYATSSPNFCFSFFYADVERSFFRLGDEKTRPLLHFHFHEGIKVGTEKRRDIQFRLVQ 876
            GF Y+TS P+      Y +++ +FF+  + +   L+HFH H  I VGT+K +D+QF +  
Sbjct: 589  GFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHIMVGTKKTKDVQFYV-- 646

Query: 875  TPVGQKRSLDDSYKINEDLKNFVHNVGEKWRGIPVLECFPFVDAEVRKACEFQGSCPSGA 696
                +    D   K+N D ++FV+ V + W G P          +  +   F G  P  +
Sbjct: 647  ----EVMDRDRKNKVNMDFQSFVNRVNDLW-GQPQFSGLDLEFDQPLRELGFHG-VPYKS 700

Query: 695  PTVFGLTSFALVGLVAEPFIVVNLYKIRGVHXXXXXXXXXXLVDMTIVFEDFKFKPDQVR 516
                  TS  LV L+  PF+V+ L +I  V+            DMTIVF+D  FK D +R
Sbjct: 701  SAFIVPTSSCLVELIETPFLVITLAEIEIVN-LERVGLGQKNFDMTIVFKD--FKRDVLR 757

Query: 515  INSKP 501
            I+S P
Sbjct: 758  IDSIP 762


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