BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005228
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56214.1| gag-pol polyprotein [Solanum lycopersicum]              57   2e-06
gb|ABA98315.1| retrotransposon protein, putative, Ty3-gypsy subc...    55   8e-06

>gb|ADU56214.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 317

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
 Frame = +3

Query: 132 NQPGQLLQQYLKLSLEIFSGSPPDPEKAEEWLQNAEHVLEHVSKDRGTWVDLVTFKFRGP 311
           N   +L  ++LKL  ++F G+  + E A ++L +   +L  +       V+ V+++F+G 
Sbjct: 155 NDQHELFSKFLKLKPQVFKGA--ESEDAYDFLVDCHELLHKMGIVERCGVEFVSYQFQGN 212

Query: 312 SRDWWKAEME---AEGGTMTWNRFKALFIDKYVP 404
           ++ WW++ +E    E   MTW  F +LF++KY P
Sbjct: 213 AKMWWRSHVECQPTEAPPMTWASFSSLFMEKYFP 246


>gb|ABA98315.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 449

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 27/139 (19%)
 Frame = +3

Query: 69  NSGSTGQTS--------NQGDMIMPA----RNQNQPG-------QLLQQYLKLSLEIFSG 191
           N GS  +TS        NQ +M+  A    +N N P          +QQ  KLS E    
Sbjct: 24  NEGSINETSPELIQVVVNQTNMLATAFQLLQNWNNPAGATNVQVPTVQQQCKLS-EFLKT 82

Query: 192 SPP------DPEKAEEWLQNAEHVLEHVSKDRGTWVDLVTFKFRGPSRDWWKA--EMEAE 347
            PP      DP +A +WL+  E  L  +       V   T +  GP+ +WW +      E
Sbjct: 83  EPPTFAIAVDPMEASDWLRTVEKKLGLIQCTDQERVGFATHQLVGPASEWWDSYEASRPE 142

Query: 348 GGTMTWNRFKALFIDKYVP 404
           G T+TWN F ++F   +VP
Sbjct: 143 GHTITWNEFSSVFKRSHVP 161