BLASTX nr result

ID: Papaver23_contig00005135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005135
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19235.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002283919.1| PREDICTED: uncharacterized protein LOC100255...   165   4e-39
ref|XP_002306549.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_002514012.1| WD and tetratricopeptide repeat protein, put...   160   8e-38
ref|XP_003602948.1| DDB1- and CUL4-associated factor [Medicago t...   160   1e-37

>emb|CBI19235.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  165 bits (417), Expect = 4e-39
 Identities = 89/141 (63%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
 Frame = -3

Query: 416 NSDAPVDDVRS-REDSDYEAEVELDFETSVSGDEANAAHSG---PHINFRFRRRSDSARE 249
           NSDA  D  RS REDSDY+ E+ELDFETSVSGDE     S      +N R  RR DSARE
Sbjct: 526 NSDASQDGPRSEREDSDYDEELELDFETSVSGDEGRDVESNILHGSLNLRIHRRCDSARE 585

Query: 248 XXXXXXXXXXXXXXXXXXXXXSYQPETVVDMKQRYVGHCNVGTDIKQASFLGQRGEYVAS 69
                                 YQPET +DMKQRYVGHCN+GTDIKQASFLG RGEYVAS
Sbjct: 586 TSGTNGACGSPTSSRNDKTT--YQPETAIDMKQRYVGHCNIGTDIKQASFLGCRGEYVAS 643

Query: 68  GSDDGRWFIWEKRTGRLVKML 6
           GSDDGRWFIW+KRTGRL+KML
Sbjct: 644 GSDDGRWFIWDKRTGRLIKML 664


>ref|XP_002283919.1| PREDICTED: uncharacterized protein LOC100255806 [Vitis vinifera]
          Length = 523

 Score =  165 bits (417), Expect = 4e-39
 Identities = 89/141 (63%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
 Frame = -3

Query: 416 NSDAPVDDVRS-REDSDYEAEVELDFETSVSGDEANAAHSG---PHINFRFRRRSDSARE 249
           NSDA  D  RS REDSDY+ E+ELDFETSVSGDE     S      +N R  RR DSARE
Sbjct: 287 NSDASQDGPRSEREDSDYDEELELDFETSVSGDEGRDVESNILHGSLNLRIHRRCDSARE 346

Query: 248 XXXXXXXXXXXXXXXXXXXXXSYQPETVVDMKQRYVGHCNVGTDIKQASFLGQRGEYVAS 69
                                 YQPET +DMKQRYVGHCN+GTDIKQASFLG RGEYVAS
Sbjct: 347 TSGTNGACGSPTSSRNDKTT--YQPETAIDMKQRYVGHCNIGTDIKQASFLGCRGEYVAS 404

Query: 68  GSDDGRWFIWEKRTGRLVKML 6
           GSDDGRWFIW+KRTGRL+KML
Sbjct: 405 GSDDGRWFIWDKRTGRLIKML 425


>ref|XP_002306549.1| predicted protein [Populus trichocarpa] gi|222855998|gb|EEE93545.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score =  161 bits (407), Expect = 6e-38
 Identities = 88/143 (61%), Positives = 98/143 (68%), Gaps = 6/143 (4%)
 Frame = -3

Query: 416 NSDAPVDDVRS-REDSDYEAEVELDFETSVSGDEA-----NAAHSGPHINFRFRRRSDSA 255
           NS+A  D   S REDSDY+ E+ELDFETSVSGDE      N  H    +N R  R+ DSA
Sbjct: 520 NSEASHDGPGSDREDSDYDEELELDFETSVSGDEGRDVEPNILHGS--LNLRIHRKGDSA 577

Query: 254 REXXXXXXXXXXXXXXXXXXXXXSYQPETVVDMKQRYVGHCNVGTDIKQASFLGQRGEYV 75
           R+                      YQPETV+DMKQRYVGHCNVGTDIKQASFLGQRG+YV
Sbjct: 578 RDSSCTNGSCGSPSSSQNDRTP--YQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYV 635

Query: 74  ASGSDDGRWFIWEKRTGRLVKML 6
           ASGSDDGRWFIWEK+TGRL+KML
Sbjct: 636 ASGSDDGRWFIWEKQTGRLIKML 658


>ref|XP_002514012.1| WD and tetratricopeptide repeat protein, putative [Ricinus
           communis] gi|223547098|gb|EEF48595.1| WD and
           tetratricopeptide repeat protein, putative [Ricinus
           communis]
          Length = 761

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/141 (59%), Positives = 95/141 (67%), Gaps = 5/141 (3%)
 Frame = -3

Query: 413 SDAPVDDVRSREDSDYEAEVELDFETSVSGDEA-----NAAHSGPHINFRFRRRSDSARE 249
           SD   D    RE+SDY+ E+ELDFETS+SGDE      N  H    +N R  RR DS+RE
Sbjct: 527 SDGSQDGPTEREESDYDEELELDFETSISGDEGRDIEPNTLHGS--LNLRIHRRGDSSRE 584

Query: 248 XXXXXXXXXXXXXXXXXXXXXSYQPETVVDMKQRYVGHCNVGTDIKQASFLGQRGEYVAS 69
                                 YQPETV+DMKQR+VGHCNVGTDIKQASFLG+RGEYVAS
Sbjct: 585 TSCTNGSCGSPSSSHNDRMP--YQPETVIDMKQRFVGHCNVGTDIKQASFLGERGEYVAS 642

Query: 68  GSDDGRWFIWEKRTGRLVKML 6
           GSDDGRWFIWEK+TGRL+KML
Sbjct: 643 GSDDGRWFIWEKQTGRLIKML 663


>ref|XP_003602948.1| DDB1- and CUL4-associated factor [Medicago truncatula]
           gi|355491996|gb|AES73199.1| DDB1- and CUL4-associated
           factor [Medicago truncatula]
          Length = 758

 Score =  160 bits (405), Expect = 1e-37
 Identities = 84/142 (59%), Positives = 96/142 (67%), Gaps = 4/142 (2%)
 Frame = -3

Query: 416 NSDAPVDDVRS-REDSDYEAEVELDFETSVSGDEANAAHSG---PHINFRFRRRSDSARE 249
           NSD   D  RS R+DSDYE E+ELDFETSVSGDE + + S      +N R  RR DS   
Sbjct: 518 NSDTSQDGQRSDRDDSDYEEEMELDFETSVSGDEEHDSDSNILHRSLNLRIHRRGDSREN 577

Query: 248 XXXXXXXXXXXXXXXXXXXXXSYQPETVVDMKQRYVGHCNVGTDIKQASFLGQRGEYVAS 69
                                SYQPE  +DMKQR++GHCNVGTDIKQA+FLGQ+GEYVAS
Sbjct: 578 VEASGSDESPSSSSSSQNGRASYQPEAAIDMKQRFIGHCNVGTDIKQANFLGQKGEYVAS 637

Query: 68  GSDDGRWFIWEKRTGRLVKMLS 3
           GSDDGRWFIWEKRTGRL+K+LS
Sbjct: 638 GSDDGRWFIWEKRTGRLMKLLS 659


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