BLASTX nr result

ID: Papaver23_contig00005022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00005022
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              107   6e-30
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   107   6e-30
gb|EEC76888.1| hypothetical protein OsI_15095 [Oryza sativa Indi...   110   2e-28
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   105   2e-28
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   105   2e-28

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  107 bits (267), Expect(2) = 6e-30
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = -3

Query: 476  IGYVAPLDELNFCQLQTPQRRLVDAVPHMCGLNPKAFRQFHSKGKAHKPGLDNMIDCELL 297
            IG +APLDEL F +LQ+ Q++LVDAVPH+ GLNP++FRQF S GKAH+PG DN++DCELL
Sbjct: 1350 IGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELL 1409

Query: 296  SHYGMLALEDQLK 258
             HY ML  E+QL+
Sbjct: 1410 CHYEMLPFEEQLE 1422



 Score = 50.8 bits (120), Expect(2) = 6e-30
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -2

Query: 258  EIAYQIGTTRMQILTNLNDLSLGTSFL 178
            EIA QIGTTRMQIL+NLNDLSLGTSFL
Sbjct: 1422 EIAQQIGTTRMQILSNLNDLSLGTSFL 1448


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  107 bits (267), Expect(2) = 6e-30
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = -3

Query: 476  IGYVAPLDELNFCQLQTPQRRLVDAVPHMCGLNPKAFRQFHSKGKAHKPGLDNMIDCELL 297
            IG +APLDEL F +LQ+ Q++LVDAVPH+ GLNP++FRQF S GKAH+PG DN++DCELL
Sbjct: 1344 IGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELL 1403

Query: 296  SHYGMLALEDQLK 258
             HY ML  E+QL+
Sbjct: 1404 CHYEMLPFEEQLE 1416



 Score = 50.8 bits (120), Expect(2) = 6e-30
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -2

Query: 258  EIAYQIGTTRMQILTNLNDLSLGTSFL 178
            EIA QIGTTRMQIL+NLNDLSLGTSFL
Sbjct: 1416 EIAQQIGTTRMQILSNLNDLSLGTSFL 1442


>gb|EEC76888.1| hypothetical protein OsI_15095 [Oryza sativa Indica Group]
          Length = 1503

 Score =  110 bits (275), Expect(2) = 2e-28
 Identities = 49/72 (68%), Positives = 63/72 (87%)
 Frame = -3

Query: 476  IGYVAPLDELNFCQLQTPQRRLVDAVPHMCGLNPKAFRQFHSKGKAHKPGLDNMIDCELL 297
            IG +AP+DEL F +LQ+ QR+LVDAVPH+CGLNP++FRQFHS GK H+PG DN+ID ELL
Sbjct: 1405 IGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQFHSNGKGHRPGPDNIIDFELL 1464

Query: 296  SHYGMLALEDQL 261
            +HY ML+L++QL
Sbjct: 1465 AHYEMLSLDEQL 1476



 Score = 42.7 bits (99), Expect(2) = 2e-28
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = -2

Query: 258  EIAYQIGTTRMQILTNLNDLSLGTSFL 178
            ++A QIGTTR QIL+N +D+SLGTSFL
Sbjct: 1477 DVAQQIGTTRSQILSNFSDISLGTSFL 1503


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  105 bits (261), Expect(2) = 2e-28
 Identities = 47/73 (64%), Positives = 62/73 (84%)
 Frame = -3

Query: 476  IGYVAPLDELNFCQLQTPQRRLVDAVPHMCGLNPKAFRQFHSKGKAHKPGLDNMIDCELL 297
            IG +APLDEL F +LQ+ QR+LVDAVPH+ GLNP++FRQF S GK H+PG ++++DCELL
Sbjct: 1363 IGCIAPLDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQFRSDGKVHRPGPESIVDCELL 1422

Query: 296  SHYGMLALEDQLK 258
            SH+ ML LE+QL+
Sbjct: 1423 SHFEMLPLEEQLE 1435



 Score = 48.1 bits (113), Expect(2) = 2e-28
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -2

Query: 258  EIAYQIGTTRMQILTNLNDLSLGTSFL 178
            EIA Q+GTTR QIL+NLNDLSLGTSFL
Sbjct: 1435 EIAQQVGTTRAQILSNLNDLSLGTSFL 1461


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  105 bits (263), Expect(2) = 2e-28
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = -3

Query: 476  IGYVAPLDELNFCQLQTPQRRLVDAVPHMCGLNPKAFRQFHSKGKAHKPGLDNMIDCELL 297
            IG +APLDE+ F +LQ+ QR+LVDAVPH+ GLNP+AFR F S GKAH+PG D+++DCELL
Sbjct: 1349 IGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFRSNGKAHRPGPDSIVDCELL 1408

Query: 296  SHYGMLALEDQLK 258
             HY ML LE+QL+
Sbjct: 1409 CHYEMLPLEEQLE 1421



 Score = 47.4 bits (111), Expect(2) = 2e-28
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -2

Query: 258  EIAYQIGTTRMQILTNLNDLSLGTSFL 178
            EIA+Q+GTTR QIL+NL+DLSLGTSFL
Sbjct: 1421 EIAHQVGTTRSQILSNLSDLSLGTSFL 1447


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