BLASTX nr result

ID: Papaver23_contig00004958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004958
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   219   2e-55
emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   219   2e-55
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   219   2e-55
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   215   3e-54
ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...   215   4e-54

>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  219 bits (559), Expect = 2e-55
 Identities = 101/112 (90%), Positives = 104/112 (92%)
 Frame = -1

Query: 382 MRLEKCWFCSSTVYPGHGIQFVRNDATIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 203
           MRLEKCWFCSSTVYPGHGIQFVRNDA IFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 202 KDMTKDSTFEFERKRNRPERYDRNTTEETLKAIKKISKIRVEREAAHHKDRM 47
           KDMT+DSTFEFERKRNRPERYDRN  E TLKAIKKI K+RV+REA HH  RM
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRM 112


>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  219 bits (559), Expect = 2e-55
 Identities = 101/112 (90%), Positives = 104/112 (92%)
 Frame = -1

Query: 382 MRLEKCWFCSSTVYPGHGIQFVRNDATIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 203
           MRLEKCWFCSSTVYPGHGIQFVRNDA IFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 57  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 116

Query: 202 KDMTKDSTFEFERKRNRPERYDRNTTEETLKAIKKISKIRVEREAAHHKDRM 47
           KDMT+DSTFEFERKRNRPERYDRN  E TLKAIKKI K+RV+REA HH  RM
Sbjct: 117 KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRM 168


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  219 bits (558), Expect = 2e-55
 Identities = 101/112 (90%), Positives = 104/112 (92%)
 Frame = -1

Query: 382 MRLEKCWFCSSTVYPGHGIQFVRNDATIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 203
           MRLEKCWFCSSTVYPGHGIQFVRNDA IFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 202 KDMTKDSTFEFERKRNRPERYDRNTTEETLKAIKKISKIRVEREAAHHKDRM 47
           KDMT+DSTFEFERKRNRPERYDRN  E TLKAIKKI K+RV+REA HH  RM
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRM 112


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  215 bits (548), Expect = 3e-54
 Identities = 99/112 (88%), Positives = 102/112 (91%)
 Frame = -1

Query: 382 MRLEKCWFCSSTVYPGHGIQFVRNDATIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 203
           MRLEKCWFCSSTVYPGHGIQFVRNDA IFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 202 KDMTKDSTFEFERKRNRPERYDRNTTEETLKAIKKISKIRVEREAAHHKDRM 47
           KDMT+DSTFEFERKRNRPERYDRN  E  LKAI KI KIRV RE  HHK+RM
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRM 112


>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  215 bits (547), Expect = 4e-54
 Identities = 98/112 (87%), Positives = 102/112 (91%)
 Frame = -1

Query: 382 MRLEKCWFCSSTVYPGHGIQFVRNDATIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 203
           MRLEKCWFCSST+YPGHGIQFVRNDA IFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 202 KDMTKDSTFEFERKRNRPERYDRNTTEETLKAIKKISKIRVEREAAHHKDRM 47
           KDMT+DSTFEFERKRNRPERYDRN  E  LKAI KI KIRV RE  HHK+RM
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRM 112


Top