BLASTX nr result

ID: Papaver23_contig00004954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004954
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-19
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    82   8e-19
ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat...    76   5e-18
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    74   6e-18
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    86   2e-17

>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 84.3 bits (207), Expect(2) = 2e-19
 Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 18/287 (6%)
 Frame = +1

Query: 1   ILIRLPLKSIVRFRCVNHSWYNQLKCPKFLKARNEYAVEMGKFNLMIHHHNDIYTFNYNS 180
           IL++LP+KS+VRFR ++    + +  P F+     +++     + +I    D++  ++++
Sbjct: 12  ILLQLPVKSLVRFRSLSKPICSLIDGPNFINLHLNHSITTKSNHSIILKEWDLFAVDFDA 71

Query: 181 SLSTCEKTSHIVYPRDFAYQDRFKNVGIEVLGCCNGLVLLRHVTXXXXXXXXXXXXXWNP 360
                E   H +Y             G EV+G  NGLV LR                +N 
Sbjct: 72  LSDAVEVKHHPLY----------SGGGTEVIGSVNGLVFLRR--------SETNIAVYNL 113

Query: 361 TTNECKRLGLPPIIGIKRNNCKSYEDYGFGYDEQIEDFKVVHLTEALWKDG--------- 513
           +T ECK+  +      +R+    Y  YGFGYD   +D+KVV + + + +DG         
Sbjct: 114 STRECKKCYVAETEIPRRDMTTGYVYYGFGYDSYGDDYKVVRMAQFVREDGGGDGGGLGC 173

Query: 514 FYEVHLYTLQSESWTRL--FSIKMDCLYYPGMSDMCRSP----VDGCFNWIARLKQHGDF 675
            YEV +Y+L+++ W ++    I++  L  P    + R           +WI  + Q  + 
Sbjct: 174 EYEVKVYSLKNDKWKKIEGLPIRLRLLSKPFFHILNRRGYGVFAGHALHWI--VPQRREL 231

Query: 676 LQGLFILRFEFETDQIDKVALPDFDE---DAQVSLCVLGGSLCCFSN 807
                +L F+   D+  ++  PD++    +  V + VL G+LC   N
Sbjct: 232 GIRDCVLGFDIRDDKFFELPQPDYENKGMNFHVDVGVLEGNLCVMCN 278



 Score = 38.5 bits (88), Expect(2) = 2e-19
 Identities = 26/97 (26%), Positives = 49/97 (50%)
 Frame = +2

Query: 827  IDVWELKDNEEEEFWTKLFTIELGEHFGFSYSFVMPLNVLKNGKIVLGLVRYGSLRIVLY 1006
            +DVW +K+   +E W K+F++   +    ++ F+ PL   K G +V  L+     +++ Y
Sbjct: 284  VDVWVMKEYGVKESWCKMFSVHAIKWIS-AFMFLRPLVYSKGGDMV--LLEVNGEKLLWY 340

Query: 1007 EPKHVTFETVALHCQSAMASASNSSVYVESLFSLGTG 1117
            + K+   + V +       S+  S +YVESL  +  G
Sbjct: 341  DWKNKHAKVVRVR---GGPSSFGSEMYVESLIRINDG 374


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 82.4 bits (202), Expect(2) = 8e-19
 Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 12/281 (4%)
 Frame = +1

Query: 1   ILIRLPLKSIVRFRCVNHSWYNQLKCPKFLKARNEYAVEMGKFNLMI----HHHNDIYTF 168
           IL RLP K ++  R V+  W   +  P F+K   +++++    NL I      H     F
Sbjct: 12  ILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSS-NLYIILRTTSHVHYMDF 70

Query: 169 NYNSSLSTCEKTSHIVYPRDFAYQDRFKNVGIEVLGCCNGLVLLRHVTXXXXXXXXXXXX 348
             N  L+ C     + +P    Y     N GI+VLG  NGL+ + +V             
Sbjct: 71  EQNLVLNDCVTLKELNHPL-MCY-----NHGIKVLGSVNGLLCISNVV--------DDIA 116

Query: 349 XWNPTTNECKRLGLPPIIGIKR----NNCKSYEDYGFGYDEQIEDFKVVHLTE--ALWKD 510
            WNP+T + + +   P I +KR     +C  Y  +GFGYD   +D+K+V + +     K 
Sbjct: 117 VWNPSTRKHRVVPFLP-IELKRYFGTKSCSVYV-FGFGYDSVRDDYKLVRIAQFGGGGKR 174

Query: 511 GF-YEVHLYTLQSESWTRLFSIKMDCLYYPGMSDMCRSPVDGCFNWIARLKQHGDFLQGL 687
            F  EV +Y+L+ +SW R+  +   C++YPG + +     +G  +W+       +     
Sbjct: 175 SFESEVKVYSLRKQSWRRIGDMPY-CVHYPGANGVF---ANGALHWVVGENPESNVAN-- 228

Query: 688 FILRFEFETDQIDKVALPDF-DEDAQVSLCVLGGSLCCFSN 807
            ++  +   +   +V  P++ D++  + L VL G LC  +N
Sbjct: 229 IVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLAN 269



 Score = 38.5 bits (88), Expect(2) = 8e-19
 Identities = 24/65 (36%), Positives = 37/65 (56%)
 Frame = +2

Query: 821  EVIDVWELKDNEEEEFWTKLFTIELGEHFGFSYSFVMPLNVLKNGKIVLGLVRYGSLRIV 1000
            E +DVW +K+   +E WTKLF++   E  GF  S + PL   K+G  V  L+ + +L + 
Sbjct: 273  ERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRS-LKPLAYSKSGDEV--LIEHDNLDLC 329

Query: 1001 LYEPK 1015
             Y+ K
Sbjct: 330  WYDLK 334


>ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 75.9 bits (185), Expect(2) = 5e-18
 Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 11/279 (3%)
 Frame = +1

Query: 1   ILIRLPLKSIVRFRCVNHSWYNQLKCPKFLKARNEYAV--EMGKFNLMIHHHNDIYTFNY 174
           IL RLP+K I+RFRCV  SW   +  PKF+K +   ++   +   N     H  I T   
Sbjct: 41  ILCRLPVKFILRFRCVCKSWNFLISDPKFVKKQLSVSIAWNLHFLNYSRWSHKYILTSYP 100

Query: 175 NSSLSTCEKTSHIVYPRDFAYQDRFKNVGIEVLGCCNGLVLLRHVTXXXXXXXXXXXXXW 354
             S+ T   ++ I    + + +DR       ++G CNG+V +                 W
Sbjct: 101 IDSIFTDITSNFIQSEYNLSNEDRTYGKLYFIIGSCNGIVCI-------ADNHNGLVILW 153

Query: 355 NPTTNECKRLGLPPIIGIKRNNCKSYEDYGFGYDEQIEDFKVVHLTEALWKDGFY----- 519
           NP+T + K+L L      +++N  +   +GFGYD   +++KVV +   L  D  Y     
Sbjct: 154 NPSTKKIKQLPL-----YEKSNGPTLMTFGFGYDSLNDNYKVVVVLAYLVLDEDYRFFNK 208

Query: 520 -EVHLYTLQSESWTRLFSIKMDCLYYPGMSDMCRSPVDGCFNWIARLKQHGDFLQGLFIL 696
            +V ++TL +  W  +       L  P M       V G  NW+  L +        FI+
Sbjct: 209 NKVKVHTLGTNIWRTIQDYPFGGLPVPVMKG---EFVSGTINWL--LSEESSECP-RFIV 262

Query: 697 RFEFETDQIDKVALPDF---DEDAQVSLCVLGGSLCCFS 804
            F+   +   K++ P+    D     +L VL   LC  S
Sbjct: 263 SFDLAKESYQKISPPNLGGVDVCDMSALSVLRDCLCVTS 301



 Score = 42.4 bits (98), Expect(2) = 5e-18
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 818  TEVIDVWELKDNEEEEFWTKLFTIELGEHFGFSYSFVMPLNVLKNGKIVLGLVRYGSLRI 997
            T  +DVW +K+   +E WTKLFTI           F   L   ++ +++L  +    L +
Sbjct: 300  TSGVDVWVMKEYGNKESWTKLFTIPCMRDPSKPEVFAKALYTFEDDQVLLKFMNDIDLNL 359

Query: 998  VLYEPKHVTFETV 1036
            VLY P+  T + +
Sbjct: 360  VLYNPRSGTLKAI 372


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 73.9 bits (180), Expect(2) = 6e-18
 Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 17/278 (6%)
 Frame = +1

Query: 1   ILIRLPLKSIVRFRCVNHSWYNQLKCPKFLKARNEYAVEMGKFNLMIHHHNDIYTFNYNS 180
           I+ RLP+K I+RF+CV  SW + +  PKF+K +           L +    +++  NY  
Sbjct: 37  IICRLPVKFILRFQCVCKSWNSLISDPKFVKKQ-----------LCVSTTRNLHFLNYAY 85

Query: 181 SLSTCEKTSHIVYPRDFAYQDRFKNVG---------IEVLGCCNGLVLLRHVTXXXXXXX 333
                  TS   YP D  + D   N              +G CNG+V +           
Sbjct: 86  DSRKYILTS---YPLDSDFTDINSNFTQSDWPYAKFYRFIGSCNGIVCI------ADNEY 136

Query: 334 XXXXXXWNPTTNECKRLGL--PPIIGIKRNNCKSYEDYGFGYDEQIEDFKVVHLTEAL-- 501
                 WNP+T + K L L   P+ G+      +   +GFGYD   +++KVV + E L  
Sbjct: 137 TSLVICWNPSTRKFKELPLFEKPMTGV------NVMTFGFGYDSSKDNYKVVVVLEYLVL 190

Query: 502 -WKDGFY---EVHLYTLQSESWTRLFSIKMDCLYYPGMSDMCRSPVDGCFNWIARLKQHG 669
              D F+   +V ++TL +  W  +       L  P   +     V G  NW+   +Q  
Sbjct: 191 DEDDSFFNKTQVKVHTLGTNIWRTIQDYHFGGLIVPMKGEF----VSGTINWLFSKEQFW 246

Query: 670 DFLQGLFILRFEFETDQIDKVALPDFDEDAQVSLCVLG 783
           ++    FI+ F+   +   K++ P+        L  LG
Sbjct: 247 EY--PCFIVSFDLAKESYQKISPPNLGGVDVCDLSALG 282



 Score = 43.9 bits (102), Expect(2) = 6e-18
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
 Frame = +2

Query: 806  MILRTEVIDVWELKDNEEEEFWTKLFTIELGEHFGFSYSFVMPLNVLKNGKIVLGLVRYG 985
            + + T   DVW +K+   +E WTKLFTI    H     +F   + V ++ +++L L    
Sbjct: 288  LCVTTSGYDVWLMKEYGNKESWTKLFTISYKRHPSKFKAFAKAIYVFEDDQVLLELYD-S 346

Query: 986  SLRIVLYEP-----KHVTFETVALHCQSAMASASN 1075
             L +VLY P     K   F+ +   C  ++ S S+
Sbjct: 347  DLNLVLYNPRSGTLKATNFKLIPEVCIESLISPSS 381


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 86.3 bits (212), Expect(2) = 2e-17
 Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 17/296 (5%)
 Frame = +1

Query: 1   ILIRLPLKSIVRFRCVNHSWYNQLKCPKFLKARNEYAVEMGKFNLMIHHHNDIYTFNYNS 180
           +L+ LP+K+++RFRC++    + +  P F+     ++++      +I    ++YT +++S
Sbjct: 12  VLLLLPVKALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNLFLILRDWNLYTLDFDS 71

Query: 181 SLSTCEKTSHI-VYPRDFAYQDRFKNVGIEVLGCCNGLVLLRHVTXXXXXXXXXXXXXWN 357
             S     + + ++P         K  G E +G CNGL+ LR+               +N
Sbjct: 72  LSSVSPAAADVLIHPLQ-------KGGGTEAVGSCNGLLALRN--------SERDLALYN 116

Query: 358 PTTNECKRLGLPPIIGIKRNNCKSYEDYGFGYDEQIEDFKVVHLTEALWKDG-------F 516
           P T + KR+ +  I    RN+   Y  YGFG+D   ED++++ +   + +D         
Sbjct: 117 PATRKYKRVPVSEIEPPDRNSKTGYVFYGFGFDSVSEDYRLIRMATFVGEDDRCESFDYE 176

Query: 517 YEVHLYTLQSESWTRLFSIK--MDCLYYPGMSDMCRS--PVDGC--FNWIARLKQHGDFL 678
           Y+V +Y+L+++SW R+  +   +  LY P    + R    V  C   +W+  +    +  
Sbjct: 177 YQVQVYSLKNDSWKRIKGLPYYLRFLYKPFFQVLHRRGYGVFACNALHWV--MPHWPELG 234

Query: 679 QGLFILRFEFETDQIDKVALPDFDEDA---QVSLCVLGGSLCCFSNDTED*GYRCV 837
               I+ F+   +   +V  P++ ++    QV   VL G LC   N     G+ C+
Sbjct: 235 VNNSIIAFDIVNETFQQVPQPNWSDNQLNFQVDAGVLEGRLCAMCNC----GHECI 286



 Score = 29.6 bits (65), Expect(2) = 2e-17
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = +2

Query: 821  EVIDVWELKDNEEEEFWTKLFTIELGEHFGFSYSFVMPLNVLKNGKIVLGLVRYGSLRIV 1000
            E ID+W +++   +E W KLF+  L +    +  F+ PL   K+ + +  L+     ++V
Sbjct: 284  ECIDLWVMEEYGVKESWIKLFSFRLSKSMS-NLMFLRPLCYSKDREKM--LLEVNDHKLV 340

Query: 1001 LYEPKHVTFETV 1036
             Y+    +  TV
Sbjct: 341  WYDWNKTSVRTV 352


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