BLASTX nr result

ID: Papaver23_contig00004908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004908
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001119460.1| smr (Small MutS Related) domain-containing p...    80   3e-13
ref|NP_001119459.1| smr (Small MutS Related) domain-containing p...    80   3e-13
gb|AAM62636.1| putative PRL1 associated protein [Arabidopsis tha...    80   3e-13
ref|NP_200680.1| smr (Small MutS Related) domain-containing prot...    80   3e-13
ref|XP_002866287.1| hypothetical protein ARALYDRAFT_919077 [Arab...    78   1e-12

>ref|NP_001119460.1| smr (Small MutS Related) domain-containing protein [Arabidopsis
           thaliana] gi|332009708|gb|AED97091.1| smr (Small MutS
           Related) domain-containing protein [Arabidopsis
           thaliana]
          Length = 506

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 65/197 (32%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
 Frame = +1

Query: 73  KKKPQKVNGEGESKEERD------VKCLAEAFSLVSLEEVNSAYKEAQGDSNKAAEILSD 234
           KK  ++   +GE K E +      ++ L EAF  VS+EE  +AYKEA GD NKAAEILSD
Sbjct: 30  KKDVEEERKDGEGKREIENVGKNFIESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSD 89

Query: 235 LMMNTDNDSSRGGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQRAHDSSGMGF 414
           L+ + D+ S+   A                                 D+ R        F
Sbjct: 90  LVESGDDPSTSSVA---------SGSSGQETASTSEYGAGSSSSCSEDLTR-----DRWF 135

Query: 415 VDCKAKKVIATAGTVSGVLGKDYVRSSPLDKERGRGGGEQQHYNSPKWKNTCMVNGISVG 594
              K  +VIA  G VS V+ KDY++ +P+ KE              + K  C     +  
Sbjct: 136 KGSKQSRVIAATGMVSSVIAKDYLKPNPVRKE---------FPMMERSKELCGNGKKAAD 186

Query: 595 NEEAEQFLFSMLGDGCD 645
            E+AEQFL SMLGD C+
Sbjct: 187 REKAEQFLSSMLGDDCE 203


>ref|NP_001119459.1| smr (Small MutS Related) domain-containing protein [Arabidopsis
           thaliana] gi|332009707|gb|AED97090.1| smr (Small MutS
           Related) domain-containing protein [Arabidopsis
           thaliana]
          Length = 471

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 65/197 (32%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
 Frame = +1

Query: 73  KKKPQKVNGEGESKEERD------VKCLAEAFSLVSLEEVNSAYKEAQGDSNKAAEILSD 234
           KK  ++   +GE K E +      ++ L EAF  VS+EE  +AYKEA GD NKAAEILSD
Sbjct: 30  KKDVEEERKDGEGKREIENVGKNFIESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSD 89

Query: 235 LMMNTDNDSSRGGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQRAHDSSGMGF 414
           L+ + D+ S+   A                                 D+ R        F
Sbjct: 90  LVESGDDPSTSSVA---------SGSSGQETASTSEYGAGSSSSCSEDLTR-----DRWF 135

Query: 415 VDCKAKKVIATAGTVSGVLGKDYVRSSPLDKERGRGGGEQQHYNSPKWKNTCMVNGISVG 594
              K  +VIA  G VS V+ KDY++ +P+ KE              + K  C     +  
Sbjct: 136 KGSKQSRVIAATGMVSSVIAKDYLKPNPVRKE---------FPMMERSKELCGNGKKAAD 186

Query: 595 NEEAEQFLFSMLGDGCD 645
            E+AEQFL SMLGD C+
Sbjct: 187 REKAEQFLSSMLGDDCE 203


>gb|AAM62636.1| putative PRL1 associated protein [Arabidopsis thaliana]
          Length = 519

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 65/197 (32%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
 Frame = +1

Query: 73  KKKPQKVNGEGESKEERD------VKCLAEAFSLVSLEEVNSAYKEAQGDSNKAAEILSD 234
           KK  ++   +GE K E +      ++ L EAF  VS+EE  +AYKEA GD NKAAEILSD
Sbjct: 30  KKDVEEERKDGEGKREIENVGKKIIESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSD 89

Query: 235 LMMNTDNDSSRGGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQRAHDSSGMGF 414
           L+ + D+ S+   A                                 D+ R        F
Sbjct: 90  LVESGDDPSTSSVA---------SGSSGQETASTSEYGAGSSSSCSEDLTR-----DRWF 135

Query: 415 VDCKAKKVIATAGTVSGVLGKDYVRSSPLDKERGRGGGEQQHYNSPKWKNTCMVNGISVG 594
              K  +VIA  G VS V+ KDY++ +P+ KE              + K  C     +  
Sbjct: 136 KGSKQSRVIAATGMVSSVIAKDYLKPNPVRKE---------FPMMERSKELCGNGKKAAD 186

Query: 595 NEEAEQFLFSMLGDGCD 645
            E+AEQFL SMLGD C+
Sbjct: 187 REKAEQFLSSMLGDDCE 203


>ref|NP_200680.1| smr (Small MutS Related) domain-containing protein [Arabidopsis
           thaliana] gi|3201477|emb|CAA06808.1| putative PRL1
           associated protein [Arabidopsis thaliana]
           gi|8843792|dbj|BAA97340.1| PRL1 associated protein-like
           [Arabidopsis thaliana] gi|17065352|gb|AAL32830.1| PRL1
           associated protein-like [Arabidopsis thaliana]
           gi|21387179|gb|AAM47993.1| PRL1-associated protein-like
           protein [Arabidopsis thaliana]
           gi|332009706|gb|AED97089.1| smr (Small MutS Related)
           domain-containing protein [Arabidopsis thaliana]
          Length = 519

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 65/197 (32%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
 Frame = +1

Query: 73  KKKPQKVNGEGESKEERD------VKCLAEAFSLVSLEEVNSAYKEAQGDSNKAAEILSD 234
           KK  ++   +GE K E +      ++ L EAF  VS+EE  +AYKEA GD NKAAEILSD
Sbjct: 30  KKDVEEERKDGEGKREIENVGKNFIESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSD 89

Query: 235 LMMNTDNDSSRGGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQRAHDSSGMGF 414
           L+ + D+ S+   A                                 D+ R        F
Sbjct: 90  LVESGDDPSTSSVA---------SGSSGQETASTSEYGAGSSSSCSEDLTR-----DRWF 135

Query: 415 VDCKAKKVIATAGTVSGVLGKDYVRSSPLDKERGRGGGEQQHYNSPKWKNTCMVNGISVG 594
              K  +VIA  G VS V+ KDY++ +P+ KE              + K  C     +  
Sbjct: 136 KGSKQSRVIAATGMVSSVIAKDYLKPNPVRKE---------FPMMERSKELCGNGKKAAD 186

Query: 595 NEEAEQFLFSMLGDGCD 645
            E+AEQFL SMLGD C+
Sbjct: 187 REKAEQFLSSMLGDDCE 203


>ref|XP_002866287.1| hypothetical protein ARALYDRAFT_919077 [Arabidopsis lyrata subsp.
           lyrata] gi|297312122|gb|EFH42546.1| hypothetical protein
           ARALYDRAFT_919077 [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 64/197 (32%), Positives = 90/197 (45%), Gaps = 4/197 (2%)
 Frame = +1

Query: 67  RKKKKPQKVNGEG----ESKEERDVKCLAEAFSLVSLEEVNSAYKEAQGDSNKAAEILSD 234
           +K  + ++ +GEG    E  E++ ++ L EAF  VS+EE  +AYKEA GD NKAAEILSD
Sbjct: 30  KKDVEEERKDGEGTKELEKVEKKIIESLMEAFCSVSMEEAMAAYKEAGGDLNKAAEILSD 89

Query: 235 LMMNTDNDSSRGGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQRAHDSSGMGF 414
           L+ + D+ S+   A                                 D+ R        F
Sbjct: 90  LVESGDDPSTSSVA---------SGSSGQETASTSEYGAGSSSSCSEDLTR-----DRWF 135

Query: 415 VDCKAKKVIATAGTVSGVLGKDYVRSSPLDKERGRGGGEQQHYNSPKWKNTCMVNGISVG 594
              K  +VIA  G VS V+ KDY++ + + KE              + K  C     +  
Sbjct: 136 KGNKQSRVIAATGMVSSVIAKDYLKPNSVRKE---------FPMMERSKELCGNGKKAAD 186

Query: 595 NEEAEQFLFSMLGDGCD 645
            E+AEQFL SMLGD C+
Sbjct: 187 REKAEQFLNSMLGDDCE 203


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