BLASTX nr result

ID: Papaver23_contig00004874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004874
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267854.2| PREDICTED: splicing factor U2af large subuni...   469   e-129
emb|CBI35712.3| unnamed protein product [Vitis vinifera]              435   e-119
ref|XP_001765745.1| predicted protein [Physcomitrella patens sub...   430   e-118
ref|XP_001766902.1| predicted protein [Physcomitrella patens sub...   423   e-116
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   417   e-114

>ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial [Vitis
            vinifera]
          Length = 410

 Score =  469 bits (1206), Expect = e-129
 Identities = 241/298 (80%), Positives = 254/298 (85%), Gaps = 3/298 (1%)
 Frame = +2

Query: 503  SGFDMAPPSTAMLSXXXXXXXXXXXXXXXXXMLQNVFPFGASQFGALSMMPAQAMTQQAT 682
            SGFDMAPP  A+L                  M+QN+FPFGA+Q GAL +MP QAMTQQAT
Sbjct: 44   SGFDMAPPVAALLPGAAVPGELPGVPQMVPGMIQNMFPFGATQLGALPLMPVQAMTQQAT 103

Query: 683  RHARRVYVGGLPPLANEQTIATFFSGVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 862
            RHARRVYVGGLPPLANEQTIATFFS VM AIGGNSAGPGDAVVNVYINHEKKFAFVEMR+
Sbjct: 104  RHARRVYVGGLPPLANEQTIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRS 163

Query: 863  VEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNLSAVGLTPGITGGV 1042
            VEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNL+AVGL PG+ GG 
Sbjct: 164  VEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNLAAVGLMPGVIGGA 223

Query: 1043 EGPDRIFVGGLPYYFTDAQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDV 1222
            EGPDRIFVGGLPYYFT+ QIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD+
Sbjct: 224  EGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 283

Query: 1223 ACAALNGLKMGDKTLTVRRAT-ASGQAK-DQENILXXXXXXXXXXKMVLQAGG-NLPG 1387
            ACAALNGLKMGDKTLTVRRAT  SGQAK +Q+NIL          K+ LQAGG NLPG
Sbjct: 284  ACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNLPG 341


>emb|CBI35712.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  435 bits (1118), Expect = e-119
 Identities = 223/268 (83%), Positives = 238/268 (88%), Gaps = 4/268 (1%)
 Frame = +2

Query: 596  MLQNVFPFGASQFGALSMMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSGVMAAI 775
            M+QN+FPFGA+Q GAL +MP QAMTQQATRHARRVYVGGLPPLANEQTIATFFS VM AI
Sbjct: 117  MIQNMFPFGATQLGALPLMPVQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMTAI 176

Query: 776  GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIMFEG-VSVRVRRPTDYNP 952
            GGNSAGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIMFE  +++    PTDYNP
Sbjct: 177  GGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIMFEACLTLIFSLPTDYNP 236

Query: 953  SLAAALGPSQPSPHLNLSAVGLTPGITGGVEGPDRIFVGGLPYYFTDAQIRELLESFGPL 1132
            SLAAALGPSQPSPHLNL+AVGL PG+ GG EGPDRIFVGGLPYYFT+ QIRELLESFGPL
Sbjct: 237  SLAAALGPSQPSPHLNLAAVGLMPGVIGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPL 296

Query: 1133 RGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACAALNGLKMGDKTLTVRRAT-ASGQAK-D 1306
            RGFDLVKDRDTGNSKGYGFCVYQDPAVTD+ACAALNGLKMGDKTLTVRRAT  SGQAK +
Sbjct: 297  RGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATVGSGQAKSE 356

Query: 1307 QENILXXXXXXXXXXKMVLQAGG-NLPG 1387
            Q+NIL          K+ LQAGG NLPG
Sbjct: 357  QDNILAQAQQHIAIQKIALQAGGLNLPG 384


>ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162682922|gb|EDQ69336.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 491

 Score =  430 bits (1106), Expect = e-118
 Identities = 216/275 (78%), Positives = 236/275 (85%), Gaps = 2/275 (0%)
 Frame = +2

Query: 503  SGFDMAPPSTAMLSXXXXXXXXXXXXXXXXXMLQNVFPFGASQ-FGALSMMPAQAMTQQA 679
            SGFDMAPP  A+++                 +   +FPFG +Q FG +  MPAQAMTQQA
Sbjct: 95   SGFDMAPPGAAVIAGAAVPGQLPGMAQPMPGVFPGMFPFGGTQQFGGIPGMPAQAMTQQA 154

Query: 680  TRHARRVYVGGLPPLANEQTIATFFSGVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 859
            TRHARRVYVGGLPP+ANEQTIAT+FS VMAA+GGN+AGPGDAVVNVYIN EKKFAFVEMR
Sbjct: 155  TRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKFAFVEMR 214

Query: 860  TVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNLSAVGLTPGITGG 1039
            TVEEASNAMALDGIMFEGVSVRVRRP+DYNPS+AA LGPSQPSPHLNL+AVGLTPG  GG
Sbjct: 215  TVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGAAGG 274

Query: 1040 VEGPDRIFVGGLPYYFTDAQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 1219
             +GPDRIFVGGLPYY T+ QI+ELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD
Sbjct: 275  ADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 334

Query: 1220 VACAALNGLKMGDKTLTVRRATASGQAK-DQENIL 1321
            VA AALNGLKMGDKTL+VRRA+ASGQ K DQ N+L
Sbjct: 335  VAIAALNGLKMGDKTLSVRRASASGQPKPDQANVL 369


>ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162681881|gb|EDQ68304.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 486

 Score =  423 bits (1088), Expect = e-116
 Identities = 215/291 (73%), Positives = 237/291 (81%), Gaps = 2/291 (0%)
 Frame = +2

Query: 503  SGFDMAPPSTAMLSXXXXXXXXXXXXXXXXXMLQNVFPFGASQ-FGALSMMPAQAMTQQA 679
            SGFDMAPP   +++                 +   +FPFG +Q FG L  MPAQAMTQQA
Sbjct: 98   SGFDMAPPGATVVAGQIPGMPPAMPG-----VFPAMFPFGGTQQFGGLPGMPAQAMTQQA 152

Query: 680  TRHARRVYVGGLPPLANEQTIATFFSGVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 859
            TRHARRVYVGGLPP+ANEQTIAT+FS VMAA+GGN+AGPGDAVVNVYIN EKKFAFVEMR
Sbjct: 153  TRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGNTAGPGDAVVNVYINQEKKFAFVEMR 212

Query: 860  TVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNLSAVGLTPGITGG 1039
            TVEEASNAMALDGI+FEGVSVRVRRP+DYNPS+AA LGPSQPSPHLNL+AVGLTPG  GG
Sbjct: 213  TVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGAAGG 272

Query: 1040 VEGPDRIFVGGLPYYFTDAQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 1219
             +GPDRIFVGGLPYY T+ QI+ELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDP+V D
Sbjct: 273  ADGPDRIFVGGLPYYLTEVQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPSVVD 332

Query: 1220 VACAALNGLKMGDKTLTVRRATASGQAK-DQENILXXXXXXXXXXKMVLQA 1369
            +ACA LNG+KM DKTL VRRATASGQ K DQ N+L          K+ LQA
Sbjct: 333  IACATLNGMKMDDKTLNVRRATASGQPKPDQANVLAHAQQQIAIQKLALQA 383


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  417 bits (1073), Expect = e-114
 Identities = 211/293 (72%), Positives = 239/293 (81%), Gaps = 3/293 (1%)
 Frame = +2

Query: 503  SGFDMAPPSTAMLSXXXXXXXXXXXXXXXXX-MLQNVFPFGASQFGALSMMPAQAMTQQA 679
            SGFDMAPP++AML+                  M  N+FP  + QFGAL +MP QAMTQQA
Sbjct: 167  SGFDMAPPASAMLAGAAAAAGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQA 226

Query: 680  TRHARRVYVGGLPPLANEQTIATFFSGVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 859
            TRHARRVYVGGL P ANEQ++ATFFS VM+AIGGN+AGPGDAVVNVYINHEKKFAFVEMR
Sbjct: 227  TRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 286

Query: 860  TVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPSPHLNLSAVGLTPGITGG 1039
            +VEEASNAMALDGI+FEG  V+VRRP+DYNPSLAA LGPSQP+P+LNL+AVGLTPG  GG
Sbjct: 287  SVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 346

Query: 1040 VEGPDRIFVGGLPYYFTDAQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTD 1219
            +EGPDRIFVGGLPYYFT+AQIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +VTD
Sbjct: 347  LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 406

Query: 1220 VACAALNGLKMGDKTLTVRRAT--ASGQAKDQENILXXXXXXXXXXKMVLQAG 1372
            +ACAALNG+KMGDKTLTVRRA   AS    +QEN+L          +++ Q G
Sbjct: 407  IACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQRLMFQPG 459


Top