BLASTX nr result

ID: Papaver23_contig00004864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004864
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...   197   3e-48
ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S...   197   4e-48
ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein S...   195   1e-47
ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [R...   194   2e-47
ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...   194   3e-47

>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  197 bits (501), Expect = 3e-48
 Identities = 95/99 (95%), Positives = 99/99 (100%)
 Frame = +2

Query: 119 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKISQL 298
           MSRSLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLENITYTAKDGK+SQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60

Query: 299 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 415
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKG+SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
           gi|297744494|emb|CBI37756.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score =  197 bits (500), Expect = 4e-48
 Identities = 94/99 (94%), Positives = 99/99 (100%)
 Frame = +2

Query: 119 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKISQL 298
           MSRSLGIPVKLLHEAAGH+VTVELKSGELYRGSMIECEDNWNCQLENIT+TAKDGK+SQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL 60

Query: 299 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 415
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAR+KGKGS+L
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGSAL 99


>ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  195 bits (495), Expect = 1e-47
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +2

Query: 119 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKISQL 298
           MSRSLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLENITYTAKDGK+SQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60

Query: 299 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 415
           EHVFIRGSKV FMVIPDMLKNAPMFKRLDARIKGKG+SL
Sbjct: 61  EHVFIRGSKVSFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
           gi|223551374|gb|EEF52860.1| small nuclear
           ribonucleoprotein, putative [Ricinus communis]
          Length = 131

 Score =  194 bits (494), Expect = 2e-47
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +2

Query: 119 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKISQL 298
           MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSM+ECEDNWNCQLE+ITYTAKDGK+SQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL 60

Query: 299 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 415
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK +SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASL 99


>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score =  194 bits (493), Expect = 3e-47
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +2

Query: 119 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKISQL 298
           MSRSLGIPVKLLHEA+GH+VTVELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGK SQL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 299 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 415
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKG+SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASL 99


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