BLASTX nr result

ID: Papaver23_contig00004860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004860
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX48743.1| pollen S [Papaver rhoeas]                              58   3e-06
emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]               58   3e-06
emb|CAN86556.1| papaver rhoeas pollen S [Papaver rhoeas]               57   4e-06

>emb|CAX48743.1| pollen S [Papaver rhoeas]
          Length = 191

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 24/74 (32%), Positives = 44/74 (59%)
 Frame = -1

Query: 613 NTNSSKIVPLISICMLCVVSLGWDRDHSGLTEGMLIASGKWFIISTMAMKLEQSAMCGLV 434
           N +++  +  I++ M+CVV++GW RD SG+TEG  +  GK  +I+  +  L  +   G+V
Sbjct: 98  NMHATAALSFIALIMICVVAIGWGRDRSGMTEGFFVGFGKLLLINLFSGNLPSALFTGIV 157

Query: 433 LAFSIICLLTSVGE 392
           L  +++  LT   +
Sbjct: 158 LFLAVVAKLTECAD 171


>emb|CAN86557.1| papaver rhoeas pollen S [Papaver rhoeas]
          Length = 193

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
 Frame = -1

Query: 604 SSKIVPLISIC-----MLCVVSLGWDRDHSGLTEGMLIASGKWFIISTMAMKLEQSAMCG 440
           ++ + P+ SIC     M+CVV+ GWDRD SG+TEG LI  GK  +++ +      S M G
Sbjct: 96  TTNMTPVTSICFLSSIMICVVAAGWDRDRSGMTEGFLIGFGKLLLVNLIREDCTASVMYG 155

Query: 439 LVLAFSIICLLT 404
            VL  +I+   T
Sbjct: 156 SVLFLAIVAKFT 167


>emb|CAN86556.1| papaver rhoeas pollen S [Papaver rhoeas]
          Length = 192

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/73 (35%), Positives = 40/73 (54%)
 Frame = -1

Query: 622 IGKNTNSSKIVPLISICMLCVVSLGWDRDHSGLTEGMLIASGKWFIISTMAMKLEQSAMC 443
           + KN     I   +S  M+CVV++GWD D SG+TEG L+  GK  ++  +      S +C
Sbjct: 95  VPKNMLPMTIFSFLSSIMICVVAVGWDCDRSGMTEGFLVGFGKLLLVYLIKQDFTFSLLC 154

Query: 442 GLVLAFSIICLLT 404
           G VL  +++   T
Sbjct: 155 GSVLCLAVVAKFT 167


Top