BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004836
         (4744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...  1875   0.0  
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...  1850   0.0  
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...  1844   0.0  
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...  1840   0.0  
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...  1837   0.0  

>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
            vinifera] gi|147841183|emb|CAN72948.1| hypothetical
            protein VITISV_033708 [Vitis vinifera]
            gi|302143287|emb|CBI21848.3| unnamed protein product
            [Vitis vinifera]
          Length = 1193

 Score = 1875 bits (4857), Expect = 0.0
 Identities = 931/982 (94%), Positives = 956/982 (97%)
 Frame = -2

Query: 4410 AWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFVETV 4231
            AW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDF+ET+
Sbjct: 27   AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFLETI 86

Query: 4230 YKISFGQIYLSKPMMTESDGETATLFPRAARLRNLTYSAPLYVDVSKRIIKKGHDCEEVT 4051
            YKISFGQIYLSKPMMTESDGETATLFP+AARLRNLTYSAPLYVDV+KRIIKKGHD EEVT
Sbjct: 87   YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHDLEEVT 146

Query: 4050 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3871
            ETQ+FTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 147  ETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 206

Query: 3870 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSGMFVRMLSRASAKGGSSGQYIRATL 3691
            MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS MFVRMLSR SAKGGSSGQYIRATL
Sbjct: 207  MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYIRATL 266

Query: 3690 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDNQMMELLRPSLEEAFVIQNQQVALDY 3511
            PYIRTEIPIIIVFRALGFVADKDILEHICYDFSD QMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 267  PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 326

Query: 3510 IGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETRKAYYFGYIIHRLLLCALGRR 3331
            IGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCET+KAYYFGYIIHRLLLCALGRR
Sbjct: 327  IGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 386

Query: 3330 PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIRAKTI 3151
            PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI+AKTI
Sbjct: 387  PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 446

Query: 3150 TTGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2971
            T+GLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 447  TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 506

Query: 2970 HNSQWGIMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEFGMENFEEISPAVI 2791
            HNS WG+MCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEE+  ENFEEISPAVI
Sbjct: 507  HNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVI 566

Query: 2790 PQSTKIFVNGCWVGIHRNPEPLVKTXXXXXXRVDVNTEVGVIREVRLKELRLYTDYGRCS 2611
            PQSTKIFVNGCWVGIHRNP+ LVKT      +VDVNTEVGVIR++RLKELRLYTDYGRCS
Sbjct: 567  PQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCS 626

Query: 2610 RPLFIVEKQRLLIKKRDIRALQQRESPEEDGWHDLVAKGYIEYVDXXXXXXTMISMTIND 2431
            RPLFIVEKQRLLIKKRDIRALQ RESPE+ GWHDLV+KG+IEYVD      TMISMTIND
Sbjct: 627  RPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISMTIND 686

Query: 2430 LVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 2251
            L+SAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 687  LISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 746

Query: 2250 TNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 2071
            TNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 747  TNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 806

Query: 2070 QSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPG 1891
            QSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRPNRENTMGMRHGSYDKLDDDGLAPPG
Sbjct: 807  QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPG 866

Query: 1890 TRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQVVLTTNADGLRF 1711
            TRVSGEDVIIGKTTPI+QDD+ QGQASRYTRRDHSTS+RHSESGMVDQV+LTTNADGLRF
Sbjct: 867  TRVSGEDVIIGKTTPISQDDS-QGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADGLRF 925

Query: 1710 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 1531
            VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI
Sbjct: 926  VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 985

Query: 1530 GQLIECIMGKVAAHVGKEGDAT 1465
            GQLIECIMGKVAAH+GKEGDAT
Sbjct: 986  GQLIECIMGKVAAHMGKEGDAT 1007


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score = 1850 bits (4793), Expect = 0.0
 Identities = 914/982 (93%), Positives = 953/982 (97%)
 Frame = -2

Query: 4410 AWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFVETV 4231
            AW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSDF ET+
Sbjct: 25   AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 84

Query: 4230 YKISFGQIYLSKPMMTESDGETATLFPRAARLRNLTYSAPLYVDVSKRIIKKGHDCEEVT 4051
            YKISFGQIYLSKPMMTESDGETATLFP+AARLRNLTYSAPLYVDV+KR+IKKGHD EEVT
Sbjct: 85   YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 144

Query: 4050 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3871
            ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 145  ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 204

Query: 3870 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSGMFVRMLSRASAKGGSSGQYIRATL 3691
            MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS MFVRMLSR SAKGGSSGQYIRATL
Sbjct: 205  MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 264

Query: 3690 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDNQMMELLRPSLEEAFVIQNQQVALDY 3511
            PYIRTEIPIIIVFRALGFVADKDILEHICYDF+D QMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 265  PYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDY 324

Query: 3510 IGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETRKAYYFGYIIHRLLLCALGRR 3331
            IGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCET+KAYYFGYIIHRLLLCALGRR
Sbjct: 325  IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 384

Query: 3330 PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIRAKTI 3151
             EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI+AKTI
Sbjct: 385  AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 444

Query: 3150 TTGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2971
            T+GLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 445  TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 504

Query: 2970 HNSQWGIMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEFGMENFEEISPAVI 2791
            HNSQWG+MCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE+G ENFEEISPAVI
Sbjct: 505  HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 564

Query: 2790 PQSTKIFVNGCWVGIHRNPEPLVKTXXXXXXRVDVNTEVGVIREVRLKELRLYTDYGRCS 2611
            PQ+TKIFVNGCWVGIHR+P+ LV+T      RVDVNTEVGV+R++RLKELR+YTDYGRCS
Sbjct: 565  PQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 624

Query: 2610 RPLFIVEKQRLLIKKRDIRALQQRESPEEDGWHDLVAKGYIEYVDXXXXXXTMISMTIND 2431
            RPLFIVEKQRLLIK++DI+ALQQRE+PE+ GWHDLVAKG+IEY+D      TMISMTIND
Sbjct: 625  RPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTIND 684

Query: 2430 LVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 2251
            LVSAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 685  LVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 744

Query: 2250 TNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 2071
            TNYQ RMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 745  TNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 804

Query: 2070 QSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPG 1891
            QSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRP+R NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 805  QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 864

Query: 1890 TRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQVVLTTNADGLRF 1711
            TRVSGEDV+IGKTTPIAQD+A QG A+RYTRRDHSTS+RHSE+GMVDQV+LTTNADGLRF
Sbjct: 865  TRVSGEDVVIGKTTPIAQDEA-QGPAARYTRRDHSTSLRHSETGMVDQVLLTTNADGLRF 923

Query: 1710 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 1531
            VKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTI
Sbjct: 924  VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPSRMTI 983

Query: 1530 GQLIECIMGKVAAHVGKEGDAT 1465
            GQLIECIMGKVAAH+GKEGDAT
Sbjct: 984  GQLIECIMGKVAAHMGKEGDAT 1005


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score = 1844 bits (4777), Expect = 0.0
 Identities = 914/982 (93%), Positives = 949/982 (96%)
 Frame = -2

Query: 4410 AWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFVETV 4231
            AW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSDF ET+
Sbjct: 28   AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87

Query: 4230 YKISFGQIYLSKPMMTESDGETATLFPRAARLRNLTYSAPLYVDVSKRIIKKGHDCEEVT 4051
            YKISFGQIYLSKPMMTESDGETATLFP+AARLRNLTYSAPLYVDV+KR+IKKGHD EEVT
Sbjct: 88   YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 147

Query: 4050 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3871
            ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148  ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207

Query: 3870 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSGMFVRMLSRASAKGGSSGQYIRATL 3691
            MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS MFVRMLSR SAKGGSSGQYIRATL
Sbjct: 208  MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 267

Query: 3690 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDNQMMELLRPSLEEAFVIQNQQVALDY 3511
            PYIRTEIPIIIVFRALGFVADKDILEHICYDFSD QMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268  PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 327

Query: 3510 IGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETRKAYYFGYIIHRLLLCALGRR 3331
            IGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCET+KAYYFGYIIHRLLLCALGRR
Sbjct: 328  IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 387

Query: 3330 PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIRAKTI 3151
             EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI+AKTI
Sbjct: 388  AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTI 447

Query: 3150 TTGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2971
            T+GLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448  TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507

Query: 2970 HNSQWGIMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEFGMENFEEISPAVI 2791
            HNSQWG+MCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE+G ENFEEISPAVI
Sbjct: 508  HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567

Query: 2790 PQSTKIFVNGCWVGIHRNPEPLVKTXXXXXXRVDVNTEVGVIREVRLKELRLYTDYGRCS 2611
            PQ+TKIFVNGCWVGIHR+P+ LVKT      RVDVNTEVGV+R++RLKELR+YTDYGRCS
Sbjct: 568  PQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627

Query: 2610 RPLFIVEKQRLLIKKRDIRALQQRESPEEDGWHDLVAKGYIEYVDXXXXXXTMISMTIND 2431
            RPLFIVEKQRLLIKK+DI ALQQRES EE GWHDLVAKG+IEY+D      TMISMTI+D
Sbjct: 628  RPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMISMTIHD 687

Query: 2430 LVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 2251
            LV AR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688  LVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747

Query: 2250 TNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 2071
            TNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 748  TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 807

Query: 2070 QSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPG 1891
            QSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRP+R NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808  QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 867

Query: 1890 TRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQVVLTTNADGLRF 1711
            TRVSGEDVIIGKTTPIAQ++A QGQ++RYTRRDHS S+RHSE+G+VDQV+LTTNADGLRF
Sbjct: 868  TRVSGEDVIIGKTTPIAQEEA-QGQSARYTRRDHSISLRHSETGIVDQVLLTTNADGLRF 926

Query: 1710 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 1531
            VKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI
Sbjct: 927  VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 986

Query: 1530 GQLIECIMGKVAAHVGKEGDAT 1465
            GQLIECIMGKVAAH+GKEGDAT
Sbjct: 987  GQLIECIMGKVAAHMGKEGDAT 1008


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score = 1840 bits (4766), Expect = 0.0
 Identities = 911/982 (92%), Positives = 948/982 (96%)
 Frame = -2

Query: 4410 AWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFVETV 4231
            AW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD  ET+
Sbjct: 33   AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDVAETI 92

Query: 4230 YKISFGQIYLSKPMMTESDGETATLFPRAARLRNLTYSAPLYVDVSKRIIKKGHDCEEVT 4051
            YKISFGQIYLSKPMMTESDGETATLFP+AARLRNLTYSAPLYVDVSKR+IKKGHD EEVT
Sbjct: 93   YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 152

Query: 4050 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3871
            ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 153  ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 212

Query: 3870 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSGMFVRMLSRASAKGGSSGQYIRATL 3691
            MSTNHVYVFKKRQPNKYA+VAEVRSMAESQNRPPS MFVRMLSR SAKGGSSGQYIRATL
Sbjct: 213  MSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 272

Query: 3690 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDNQMMELLRPSLEEAFVIQNQQVALDY 3511
            PYIR EIPIIIVFRALGFVADKDILEHICYDFSD QMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 273  PYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 332

Query: 3510 IGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETRKAYYFGYIIHRLLLCALGRR 3331
            IGKRGSTVGVT+EKRIKYAKEILQKEMLPHVGVGE+CET+KAYYFGYIIHRLLLCALGRR
Sbjct: 333  IGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCALGRR 392

Query: 3330 PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIRAKTI 3151
             EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI+AKTI
Sbjct: 393  AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 452

Query: 3150 TTGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2971
            T+GLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 453  TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 512

Query: 2970 HNSQWGIMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEFGMENFEEISPAVI 2791
            HNSQWG+MCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE+G ENFEEISPAVI
Sbjct: 513  HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 572

Query: 2790 PQSTKIFVNGCWVGIHRNPEPLVKTXXXXXXRVDVNTEVGVIREVRLKELRLYTDYGRCS 2611
            PQ+TKIFVNGCWVGIHR+PE LVKT      RVDVNTEVGV+R++RLKELR+YTDYGRCS
Sbjct: 573  PQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 632

Query: 2610 RPLFIVEKQRLLIKKRDIRALQQRESPEEDGWHDLVAKGYIEYVDXXXXXXTMISMTIND 2431
            RPLFIVEKQRLLIKK+DI ALQQRESPE+ GWHDLVAKG+IEY+D      TMISMTI+D
Sbjct: 633  RPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTISD 692

Query: 2430 LVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 2251
            L+ AR NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 693  LIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 752

Query: 2250 TNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 2071
            TNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 753  TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 812

Query: 2070 QSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPG 1891
            QSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRP+R NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 813  QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 872

Query: 1890 TRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQVVLTTNADGLRF 1711
            TRVSGEDVIIGKTTPI+Q++A QGQA+RY+RRDHS S+RHSE+G+VDQV+LTTNADGLRF
Sbjct: 873  TRVSGEDVIIGKTTPISQEEA-QGQAARYSRRDHSISLRHSENGIVDQVLLTTNADGLRF 931

Query: 1710 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 1531
            VKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI
Sbjct: 932  VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 991

Query: 1530 GQLIECIMGKVAAHVGKEGDAT 1465
            GQLIECIMGKVAAH+GKEGDAT
Sbjct: 992  GQLIECIMGKVAAHMGKEGDAT 1013


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
            gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
            Full=DNA-directed RNA polymerase II subunit RPB2;
            Short=RNA polymerase II subunit 2; Short=RNA polymerase
            II subunit B2; AltName: Full=DNA-directed RNA polymerase
            II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
            polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score = 1837 bits (4758), Expect = 0.0
 Identities = 908/982 (92%), Positives = 949/982 (96%)
 Frame = -2

Query: 4410 AWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDFVETV 4231
            AW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSDF ET+
Sbjct: 25   AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 84

Query: 4230 YKISFGQIYLSKPMMTESDGETATLFPRAARLRNLTYSAPLYVDVSKRIIKKGHDCEEVT 4051
            YKI+FGQIYLSKPMMTESDGETATLFP+AARLRNLTYSAPLYVDV+KR+IKKGHD EEVT
Sbjct: 85   YKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 144

Query: 4050 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3871
            ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLIAQEK
Sbjct: 145  ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEK 204

Query: 3870 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSGMFVRMLSRASAKGGSSGQYIRATL 3691
            MSTNHVYVFKKRQPNKYA+VAEVRSMA++QNRPPS MFVRMLSR SAKGGSSGQYIRATL
Sbjct: 205  MSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 264

Query: 3690 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDNQMMELLRPSLEEAFVIQNQQVALDY 3511
            PYIRTEIPIIIVFRALGFVADKDILEHICYDF+D QMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 265  PYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDY 324

Query: 3510 IGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETRKAYYFGYIIHRLLLCALGRR 3331
            IGKRG+TVGVTREKRIKYAKEILQKEMLPHVGVGEYCET+KAYYFGYIIHRLLLCALGRR
Sbjct: 325  IGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 384

Query: 3330 PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIRAKTI 3151
             EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI+AKTI
Sbjct: 385  AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 444

Query: 3150 TTGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2971
            T+GLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 445  TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 504

Query: 2970 HNSQWGIMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEFGMENFEEISPAVI 2791
            HNSQWG+MCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEE+G ENFEEISPAVI
Sbjct: 505  HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 564

Query: 2790 PQSTKIFVNGCWVGIHRNPEPLVKTXXXXXXRVDVNTEVGVIREVRLKELRLYTDYGRCS 2611
            PQ+TKIFVNG WVGIHR+P+ LV+T      RVDVNTEVGV+R++RLKELR+YTDYGRCS
Sbjct: 565  PQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 624

Query: 2610 RPLFIVEKQRLLIKKRDIRALQQRESPEEDGWHDLVAKGYIEYVDXXXXXXTMISMTIND 2431
            RPLFIVEKQRL+IKK+DI+ LQQRESP+E GWHDLVAKGYIEY+D      TMISMTIND
Sbjct: 625  RPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMISMTIND 684

Query: 2430 LVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 2251
            LV AR NP +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 685  LVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 744

Query: 2250 TNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 2071
            TNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 745  TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 804

Query: 2070 QSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPG 1891
            QSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFGRP+R +TMGMRHGSYDKLDDDGLAPPG
Sbjct: 805  QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDGLAPPG 864

Query: 1890 TRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHSTSMRHSESGMVDQVVLTTNADGLRF 1711
            TRVSGEDVIIGKTTPI+QDDA QGQASRYTR+DHSTS+RHSE+GMVDQV+LTTNADGLRF
Sbjct: 865  TRVSGEDVIIGKTTPISQDDA-QGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRF 923

Query: 1710 VKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 1531
            VKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI
Sbjct: 924  VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 983

Query: 1530 GQLIECIMGKVAAHVGKEGDAT 1465
            GQLIECIMGKVAAH+GKEGDAT
Sbjct: 984  GQLIECIMGKVAAHMGKEGDAT 1005