BLASTX nr result

ID: Papaver23_contig00004824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004824
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK55664.1|AF378861_1 AT3g60770/T4C21_180 [Arabidopsis thalia...    92   3e-16
ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...    92   3e-16
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...    92   3e-16
ref|NP_567104.1| 40S ribosomal protein S13-1 [Arabidopsis thalia...    92   3e-16
emb|CAB82681.1| ribosomal protein S13-like [Arabidopsis thaliana]      92   3e-16

>gb|AAK55664.1|AF378861_1 AT3g60770/T4C21_180 [Arabidopsis thaliana]
           gi|15450535|gb|AAK96445.1| AT3g60770/T4C21_180
           [Arabidopsis thaliana]
          Length = 151

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 971 GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 837
           GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH
Sbjct: 79  GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 123


>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 971 GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 837
           GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH
Sbjct: 79  GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 123


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 971 GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 837
           GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH
Sbjct: 79  GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 123


>ref|NP_567104.1| 40S ribosomal protein S13-1 [Arabidopsis thaliana]
           gi|27808637|sp|P59223.1|RS131_ARATH RecName: Full=40S
           ribosomal protein S13-1
           gi|14190473|gb|AAK55717.1|AF380636_1 AT3g60770/T4C21_180
           [Arabidopsis thaliana] gi|15810101|gb|AAL06976.1|
           AT3g60770/T4C21_180 [Arabidopsis thaliana]
           gi|19699318|gb|AAL91269.1| AT3g60770/T4C21_180
           [Arabidopsis thaliana] gi|332646585|gb|AEE80106.1| 40S
           ribosomal protein S13-1 [Arabidopsis thaliana]
          Length = 151

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 971 GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 837
           GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH
Sbjct: 79  GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 123


>emb|CAB82681.1| ribosomal protein S13-like [Arabidopsis thaliana]
          Length = 150

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 971 GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 837
           GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH
Sbjct: 79  GLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 123


Top