BLASTX nr result

ID: Papaver23_contig00004808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004808
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41594.1| unknown [Medicago truncatula]                          193   2e-47
ref|XP_002299952.1| predicted protein [Populus trichocarpa] gi|2...   191   8e-47
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote...   190   1e-46
ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycin...   190   1e-46
ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like prote...   189   4e-46

>gb|AFK41594.1| unknown [Medicago truncatula]
          Length = 99

 Score =  193 bits (491), Expect = 2e-47
 Identities = 97/99 (97%), Positives = 98/99 (98%)
 Frame = +2

Query: 32  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGFDQLLNLVLDEAVEFLRDSDDPLKT 211
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKG+DQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 212 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 328
           TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA
Sbjct: 61  TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 99


>ref|XP_002299952.1| predicted protein [Populus trichocarpa]
           gi|224104033|ref|XP_002313290.1| predicted protein
           [Populus trichocarpa] gi|118483640|gb|ABK93714.1|
           unknown [Populus trichocarpa]
           gi|222847210|gb|EEE84757.1| predicted protein [Populus
           trichocarpa] gi|222849698|gb|EEE87245.1| predicted
           protein [Populus trichocarpa]
          Length = 99

 Score =  191 bits (485), Expect = 8e-47
 Identities = 95/99 (95%), Positives = 98/99 (98%)
 Frame = +2

Query: 32  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGFDQLLNLVLDEAVEFLRDSDDPLKT 211
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKG+DQLLNLVLDEAVEFLRD+DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 60

Query: 212 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 328
           TDQTR LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99


>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
           max]
          Length = 99

 Score =  190 bits (483), Expect = 1e-46
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +2

Query: 32  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGFDQLLNLVLDEAVEFLRDSDDPLKT 211
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKG+DQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 212 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 328
           TDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDG+
Sbjct: 61  TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS 99


>ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycine max]
           gi|255628715|gb|ACU14702.1| unknown [Glycine max]
          Length = 99

 Score =  190 bits (483), Expect = 1e-46
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +2

Query: 32  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGFDQLLNLVLDEAVEFLRDSDDPLKT 211
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKG+DQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 212 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 328
           TDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDG+
Sbjct: 61  TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGS 99


>ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Cucumis sativus] gi|449463765|ref|XP_004149602.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Cucumis sativus]
           gi|449530742|ref|XP_004172352.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 1
           [Cucumis sativus] gi|449530744|ref|XP_004172353.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Cucumis sativus]
          Length = 99

 Score =  189 bits (479), Expect = 4e-46
 Identities = 94/99 (94%), Positives = 96/99 (96%)
 Frame = +2

Query: 32  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGFDQLLNLVLDEAVEFLRDSDDPLKT 211
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKG+DQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 212 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 328
           TDQTR LGLIVCRGTAVMLVSP DGTDEIANPF+QPDGA
Sbjct: 61  TDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA 99


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