BLASTX nr result
ID: Papaver23_contig00004790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00004790
(1753 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002798051.1| ribosome biogenesis protein BMS1 [Paracoccid... 374 e-101
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [... 317 8e-84
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ... 315 3e-83
emb|CBI17233.3| unnamed protein product [Vitis vinifera] 315 3e-83
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2... 312 2e-82
>ref|XP_002798051.1| ribosome biogenesis protein BMS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280701|gb|EEH36267.1| ribosome biogenesis protein
BMS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 759
Score = 374 bits (959), Expect = e-101
Identities = 211/535 (39%), Positives = 298/535 (55%), Gaps = 41/535 (7%)
Frame = +3
Query: 3 PKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNN-MNGMIDAAKYADA 179
P VGK+ L+KSLIK + +Q GP TV+T RRR+ F+ECP++ + MID AK AD
Sbjct: 85 PGVGKTTLVKSLIKRYTKQTLSSPAGPLTVVTSKRRRLTFLECPSDSLASMIDVAKIADI 144
Query: 180 VILITDANYGYEMETFEYLNLLQVHGMP-KVMGALTYLDKIKDANARTLTKRRLMDRFRD 356
V+L+ D NYG+EMET E+LN L GMP V G LT+LD K + K+RL RF
Sbjct: 145 VLLMIDGNYGFEMETMEFLNSLSASGMPGNVFGILTHLDLFKKQSTLRQAKKRLKHRFWS 204
Query: 357 NIHKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEF-HTSSWRAAHPYLLVDHFKDVTSP 533
+++ A++FYLSG+++G Y + EI L+ FLSVM+ WR +HPY L D F D+T+P
Sbjct: 205 ELYQGAKLFYLSGVINGRYPDREIHNLSRFLSVMKNPRPLIWRNSHPYCLADRFLDITAP 264
Query: 534 ANVHMDGKCNRDIFLYGYLRGCDIKK-GTKVHIAGVGDYPLAGVAIKADPCPLPPVD--- 701
V + KC+R + LYGYLRG + G +VH+ GVGD ++ + DPCP P +D
Sbjct: 265 TAVEENPKCDRTVALYGYLRGTNFPALGARVHVPGVGDLSVSSIEALPDPCPTPFMDKAM 324
Query: 702 ------DNEKKMQDKE-----PHSAI----------------------ESFRIGTYLRFR 782
+++ +K+ P S + E ++ GTY R
Sbjct: 325 AKATGKPGRRRLGEKQKLLFAPMSDVGGVLVDKACKFDFLDALSRARAEGYKAGTYARIV 384
Query: 783 VLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRHSWHMNKLKTKDPIIVSIGWR 962
+ VP E T +P P++VGG++ ED G++QVR+ RH WH LKT DP+I S+GWR
Sbjct: 385 LENVPCEFSTRFNPRFPVIVGGLAPTEDRFGYVQVRIKRHRWHKKILKTNDPLIFSLGWR 444
Query: 963 RYQTTPIY-YQDSNGRHEMLEYTPEDQPCLATFWXXXXXXXXXXXXXQSLADNKAAFRIL 1139
R+QTTP+Y DS R+ ML+YTPE C TF+ QS ++ FRI
Sbjct: 445 RFQTTPVYSISDSRTRNRMLKYTPEHMHCFGTFYGPLVAPNTGFCCVQSFSNKNPGFRIA 504
Query: 1140 ATAELLDLNHTANIVKKIKRIGTPCLIMSETALIKDMFTSDDEVDRFRDVKIRTACGIQG 1319
AT +L+++ T IVKK+K G P I TA IKDMFTS E+ +F IRT GI+G
Sbjct: 505 ATGVVLNVDETTEIVKKLKLTGYPYKIFRNTAFIKDMFTSAIEIAKFEGASIRTVSGIRG 564
Query: 1320 EVNEAAKPYLLNLVKWNDSQPRKGIAKCTFDRRICMSDTILMDEWTKVEVPCIFN 1484
++ A S+P +G + TF+ +I MSD + + W ++ +N
Sbjct: 565 QIKRAL------------SRP-EGHFRATFEDKILMSDIVFLRAWYPIKPHRYYN 606
>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
bms1, putative [Ricinus communis]
Length = 825
Score = 317 bits (811), Expect = 8e-84
Identities = 149/243 (61%), Positives = 188/243 (77%)
Frame = +3
Query: 3 PKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADAV 182
P+VGKS+LIKSL+KH+ + N RGP T+++G +RR+QFVECPN++NGMIDAAK+AD
Sbjct: 95 PQVGKSLLIKSLVKHYTKHNLPEVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLA 154
Query: 183 ILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDNI 362
+L+ D +YG+EMETFE+LN+LQVHG PKVMG LT+LDK KD TK+RL RF I
Sbjct: 155 LLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEI 214
Query: 363 HKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPANV 542
+ A++FYLSGL+HG Y EI LA F+SVM+FH SWR +HPY+LVD F+DVT P V
Sbjct: 215 YDGAKLFYLSGLIHGKYPRREIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQV 274
Query: 543 HMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKMQ 722
HM+ K +R++ LYGYLRGC++KKGTKVHIAGVGDY LAGV ADPCPLP +K ++
Sbjct: 275 HMNRKSDRNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSA-AKKKGLR 333
Query: 723 DKE 731
DKE
Sbjct: 334 DKE 336
Score = 127 bits (318), Expect = 1e-26
Identities = 60/96 (62%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = +3
Query: 723 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 902
D+ IE F+ GTY+R V VPFEMV + DPC PILVGGI E+NVG+MQ RL RH
Sbjct: 726 DEVTRLEIEGFQTGTYVRLEVHDVPFEMVEHFDPCHPILVGGIGFGEENVGYMQARLKRH 785
Query: 903 SWHMNKLKTKDPIIVSIGWRRYQTTPIY-YQDSNGR 1007
WH LKT+DPIIVSIGWRRYQTTP+Y +D NG+
Sbjct: 786 RWHRKVLKTRDPIIVSIGWRRYQTTPVYAIEDCNGK 821
>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
vinifera]
Length = 1139
Score = 315 bits (806), Expect = 3e-83
Identities = 148/243 (60%), Positives = 189/243 (77%)
Frame = +3
Query: 3 PKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADAV 182
P+VGKS+LIKSL+KH+ + N RGP T+++G RR+QFVECPN++NGMIDAAK+AD
Sbjct: 95 PQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLA 154
Query: 183 ILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDNI 362
+L+ D +YG+EMETFE+LN+LQVHG PKVMG LT+LDK KDA TK+RL RF I
Sbjct: 155 LLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEI 214
Query: 363 HKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPANV 542
+ A++FYLSGL+HG Y EI LA F+SVM+FH SWRA+HPY+LVD F+DVT P V
Sbjct: 215 YDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERV 274
Query: 543 HMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKMQ 722
++ KC+R+I LYGYLRGC++KKGTKVHIAGVGD+ LAGV ADPCPLP +K ++
Sbjct: 275 QLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSA-AKKKGLR 333
Query: 723 DKE 731
D++
Sbjct: 334 DRD 336
Score = 308 bits (790), Expect = 2e-81
Identities = 151/271 (55%), Positives = 188/271 (69%), Gaps = 1/271 (0%)
Frame = +3
Query: 723 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 902
D+E +E FR GTYLR V VPFEMV + DP P+LVGGI E+NVG+MQVR+ RH
Sbjct: 726 DEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRIKRH 785
Query: 903 SWHMNKLKTKDPIIVSIGWRRYQTTPIYY-QDSNGRHEMLEYTPEDQPCLATFWXXXXXX 1079
WH LKT+DPIIVSIGWRRYQT P+Y +D NGRH ML+YT E CLA FW
Sbjct: 786 RWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPP 845
Query: 1080 XXXXXXXQSLADNKAAFRILATAELLDLNHTANIVKKIKRIGTPCLIMSETALIKDMFTS 1259
Q+L++N+A FRI+ATA +L+ NH A +VKKIK +G PC I +TALIK+MFTS
Sbjct: 846 NTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTS 905
Query: 1260 DDEVDRFRDVKIRTACGIQGEVNEAAKPYLLNLVKWNDSQPRKGIAKCTFDRRICMSDTI 1439
D E+ RF ++TA GI+G+V +AAK L N K PR+GIA+CTF+ RI MSD +
Sbjct: 906 DLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILMSDLV 965
Query: 1440 LMDEWTKVEVPCIFNPLTTALEPSNRVWQCM 1532
+ WT+VEVPC FNPLTTAL+P ++ WQ M
Sbjct: 966 FLRAWTEVEVPCFFNPLTTALQPRDQTWQGM 996
>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
Length = 1305
Score = 315 bits (806), Expect = 3e-83
Identities = 148/243 (60%), Positives = 189/243 (77%)
Frame = +3
Query: 3 PKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADAV 182
P+VGKS+LIKSL+KH+ + N RGP T+++G RR+QFVECPN++NGMIDAAK+AD
Sbjct: 95 PQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADLA 154
Query: 183 ILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDNI 362
+L+ D +YG+EMETFE+LN+LQVHG PKVMG LT+LDK KDA TK+RL RF I
Sbjct: 155 LLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEI 214
Query: 363 HKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPANV 542
+ A++FYLSGL+HG Y EI LA F+SVM+FH SWRA+HPY+LVD F+DVT P V
Sbjct: 215 YDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERV 274
Query: 543 HMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKMQ 722
++ KC+R+I LYGYLRGC++KKGTKVHIAGVGD+ LAGV ADPCPLP +K ++
Sbjct: 275 QLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSA-AKKKGLR 333
Query: 723 DKE 731
D++
Sbjct: 334 DRD 336
Score = 308 bits (790), Expect = 2e-81
Identities = 151/271 (55%), Positives = 188/271 (69%), Gaps = 1/271 (0%)
Frame = +3
Query: 723 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 902
D+E +E FR GTYLR V VPFEMV + DP P+LVGGI E+NVG+MQVR+ RH
Sbjct: 892 DEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRIKRH 951
Query: 903 SWHMNKLKTKDPIIVSIGWRRYQTTPIYY-QDSNGRHEMLEYTPEDQPCLATFWXXXXXX 1079
WH LKT+DPIIVSIGWRRYQT P+Y +D NGRH ML+YT E CLA FW
Sbjct: 952 RWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPP 1011
Query: 1080 XXXXXXXQSLADNKAAFRILATAELLDLNHTANIVKKIKRIGTPCLIMSETALIKDMFTS 1259
Q+L++N+A FRI+ATA +L+ NH A +VKKIK +G PC I +TALIK+MFTS
Sbjct: 1012 NTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTS 1071
Query: 1260 DDEVDRFRDVKIRTACGIQGEVNEAAKPYLLNLVKWNDSQPRKGIAKCTFDRRICMSDTI 1439
D E+ RF ++TA GI+G+V +AAK L N K PR+GIA+CTF+ RI MSD +
Sbjct: 1072 DLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPREGIARCTFEDRILMSDLV 1131
Query: 1440 LMDEWTKVEVPCIFNPLTTALEPSNRVWQCM 1532
+ WT+VEVPC FNPLTTAL+P ++ WQ M
Sbjct: 1132 FLRAWTEVEVPCFFNPLTTALQPRDQTWQGM 1162
>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
predicted protein [Populus trichocarpa]
Length = 1181
Score = 312 bits (800), Expect = 2e-82
Identities = 145/243 (59%), Positives = 186/243 (76%)
Frame = +3
Query: 3 PKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADAV 182
P+VGKS+LIK L+KH+ + N RGP T+++G +RR+QFVECPN++NGMIDAAK+AD
Sbjct: 92 PQVGKSLLIKCLVKHYTKHNIQEVRGPITIVSGKKRRVQFVECPNDINGMIDAAKFADLA 151
Query: 183 ILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDNI 362
+L+ D +YG+EMETFE+LN+LQVHG PK+MG LT+LD+ KD TK+RL RF I
Sbjct: 152 LLLIDGSYGFEMETFEFLNILQVHGFPKIMGVLTHLDQFKDVKKLKKTKQRLKHRFWTEI 211
Query: 363 HKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPANV 542
+ A++FYLSGL+HG Y EI LA F+SVM+FH SWR +HPY+L D F+DVT P V
Sbjct: 212 YDGAKLFYLSGLIHGKYVKREIHNLARFISVMKFHPLSWRTSHPYVLADRFEDVTPPERV 271
Query: 543 HMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKMQ 722
+D KC+R+I LYGYLRGC++K+GTKVHIAGVGDY LAGV ADPCPLP +K ++
Sbjct: 272 RVDNKCDRNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVTALADPCPLPSA-AKKKGLR 330
Query: 723 DKE 731
DKE
Sbjct: 331 DKE 333
Score = 309 bits (792), Expect = 1e-81
Identities = 150/271 (55%), Positives = 186/271 (68%), Gaps = 1/271 (0%)
Frame = +3
Query: 723 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 902
D+E IE F+ GTYLR + VPFEMV + DPC PILVGGI E++VG+MQ RL RH
Sbjct: 767 DEETRLEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQARLKRH 826
Query: 903 SWHMNKLKTKDPIIVSIGWRRYQTTPIY-YQDSNGRHEMLEYTPEDQPCLATFWXXXXXX 1079
WH LKTKDP+I SIGWRRYQTTP+Y +D NGRH ML+YTPE CLATFW
Sbjct: 827 RWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLAPP 886
Query: 1080 XXXXXXXQSLADNKAAFRILATAELLDLNHTANIVKKIKRIGTPCLIMSETALIKDMFTS 1259
Q+LA+N+A+FRI ATA +L+ NH A +VKK+K +G PC I +TALI +MFTS
Sbjct: 887 NTGVVAVQNLANNQASFRITATAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNMFTS 946
Query: 1260 DDEVDRFRDVKIRTACGIQGEVNEAAKPYLLNLVKWNDSQPRKGIAKCTFDRRICMSDTI 1439
D EV RF +RT GI+G+V +AAK + N PR+GIA+CTF+ RI MSD +
Sbjct: 947 DLEVARFEGAAVRTVSGIRGQVKKAAKDEIGNQPTKKGGAPREGIARCTFEDRILMSDIV 1006
Query: 1440 LMDEWTKVEVPCIFNPLTTALEPSNRVWQCM 1532
+ WT+VE PC +NPLTTAL+P N+ WQ M
Sbjct: 1007 FLRAWTQVEAPCFYNPLTTALQPRNKTWQGM 1037