BLASTX nr result

ID: Papaver23_contig00004712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004712
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit...   436   e-120
ref|XP_002516394.1| spliceosome associated protein, putative [Ri...   431   e-118
ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat...   426   e-117
gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]       425   e-117
emb|CBI17545.3| unnamed protein product [Vitis vinifera]              423   e-116

>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
          Length = 373

 Score =  436 bits (1120), Expect = e-120
 Identities = 222/268 (82%), Positives = 230/268 (85%)
 Frame = +2

Query: 35  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 214
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60

Query: 215 VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLX 394
           VTNLHQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKSLDVGANLFVGNL 
Sbjct: 61  VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNL- 119

Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXDEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFI 574
                                   DEKLLYDTFSAFG IV+NPKIMRDP+TGNSRGFGF+
Sbjct: 120 --------------------DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFV 159

Query: 575 SYDSFDTSDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRP 754
           SYDSF+ SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP   K+RP
Sbjct: 160 SYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRP 219

Query: 755 HTMFASGPPTLLNGPAQGNNGPMGAPMP 838
           HT+FASGPPTL N P    NG MGAPMP
Sbjct: 220 HTLFASGPPTLPNVPQA--NGNMGAPMP 245


>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
           gi|223544492|gb|EEF46011.1| spliceosome associated
           protein, putative [Ricinus communis]
          Length = 376

 Score =  431 bits (1107), Expect = e-118
 Identities = 220/268 (82%), Positives = 230/268 (85%)
 Frame = +2

Query: 35  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 214
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 215 VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLX 394
           VTNLHQGYGFVEFRSEEDADYAIK +NMIKL GKPIRVNKASQDKKSLDVGANLF+GNL 
Sbjct: 61  VTNLHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNL- 119

Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXDEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFI 574
                                   DEKLL+DTFSAFG IV+NPKIMRDPETGNSRGFGFI
Sbjct: 120 --------------------DPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFI 159

Query: 575 SYDSFDTSDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRP 754
           SYDSFD SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP + K+RP
Sbjct: 160 SYDSFDASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRP 219

Query: 755 HTMFASGPPTLLNGPAQGNNGPMGAPMP 838
           HT+FASGPPTL + P    NG +GAP+P
Sbjct: 220 HTLFASGPPTLPSIPQA--NGTVGAPVP 245


>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355489744|gb|AES70947.1| Splicing factor 3B subunit
           [Medicago truncatula]
          Length = 379

 Score =  426 bits (1095), Expect = e-117
 Identities = 216/268 (80%), Positives = 228/268 (85%)
 Frame = +2

Query: 35  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 214
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQ+SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60

Query: 215 VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLX 394
           VTN HQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKSLDVGANLF+GNL 
Sbjct: 61  VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL- 119

Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXDEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFI 574
                                   DEKLLYDTFSAFG IV+NPKIMRDP+TGNSRGFGFI
Sbjct: 120 --------------------DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFI 159

Query: 575 SYDSFDTSDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRP 754
           SYDSF+ SD+AIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP   K+RP
Sbjct: 160 SYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRP 219

Query: 755 HTMFASGPPTLLNGPAQGNNGPMGAPMP 838
           HT+FASGPP+L N P    NG + AP+P
Sbjct: 220 HTLFASGPPSLPNAPQA--NGTIPAPVP 245


>gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
          Length = 368

 Score =  425 bits (1093), Expect = e-117
 Identities = 218/268 (81%), Positives = 226/268 (84%)
 Frame = +2

Query: 35  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 214
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 215 VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLX 394
           VTN HQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKS+DVGANLF+GNL 
Sbjct: 61  VTNSHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSVDVGANLFIGNL- 119

Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXDEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFI 574
                                   DEKLLYDTFSAFG IV+NPKIMRDPETGNSRGFGFI
Sbjct: 120 --------------------DPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFI 159

Query: 575 SYDSFDTSDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRP 754
           SYDSF+ SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP   K+RP
Sbjct: 160 SYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPNVQKSRP 219

Query: 755 HTMFASGPPTLLNGPAQGNNGPMGAPMP 838
           HTMFASGPPTL N      N  + AP+P
Sbjct: 220 HTMFASGPPTLQNVAQASAN--IAAPVP 245


>emb|CBI17545.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  423 bits (1087), Expect = e-116
 Identities = 213/253 (84%), Positives = 221/253 (87%)
 Frame = +2

Query: 35  MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 214
           MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60

Query: 215 VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLHGKPIRVNKASQDKKSLDVGANLFVGNLX 394
           VTNLHQGYGFVEFRSEEDADYAIK LNMIKL+GKPIRVNKASQDKKSLDVGANLFVGNL 
Sbjct: 61  VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNL- 119

Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXDEKLLYDTFSAFGAIVSNPKIMRDPETGNSRGFGFI 574
                                   DEKLLYDTFSAFG IV+NPKIMRDP+TGNSRGFGF+
Sbjct: 120 --------------------DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFV 159

Query: 575 SYDSFDTSDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPGTTKNRP 754
           SYDSF+ SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP   K+RP
Sbjct: 160 SYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRP 219

Query: 755 HTMFASGPPTLLN 793
           HT+FASGPPTL N
Sbjct: 220 HTLFASGPPTLPN 232


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