BLASTX nr result

ID: Papaver23_contig00004709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004709
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chl...   200   9e-50
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...   199   2e-49
ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|1...   198   4e-49
ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group] g...   197   9e-49
ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|2...   197   9e-49

>ref|XP_003557154.1| PREDICTED: chaperonin 60 subunit beta 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 599

 Score =  200 bits (509), Expect = 9e-50
 Identities = 106/139 (76%), Positives = 120/139 (86%)
 Frame = +2

Query: 68  MASTLTTMSSVGSVAATCSRATTDKKLSSSSQISTVRFAGRRQNVVLQRRCSSKIKAAKE 247
           MASTL+  S+VG +A   +   +DKK SS S +S++  A R +NV LQR+C+ ++KAAKE
Sbjct: 1   MASTLSATSTVGLMATGIA---SDKKSSSLSSVSSISLASRPRNVRLQRKCNFRVKAAKE 57

Query: 248 LYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELE 427
           LYFNKDGSA KKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA+EVELE
Sbjct: 58  LYFNKDGSATKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELE 117

Query: 428 DPVENIGAKLVRQAAAKTN 484
           DPVENIGAKLVRQAAAKTN
Sbjct: 118 DPVENIGAKLVRQAAAKTN 136


>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297746501|emb|CBI16557.3| unnamed protein product
           [Vitis vinifera]
          Length = 608

 Score =  199 bits (505), Expect = 2e-49
 Identities = 114/146 (78%), Positives = 122/146 (83%), Gaps = 7/146 (4%)
 Frame = +2

Query: 68  MASTLTTMSSVGSVAATCSR------ATTDKKLSSSSQISTVRFAGRRQNVVLQRRCSSK 229
           MAS  TTMSSVGS+AA   R      AT+  +LSS + IS+  F GRRQNVVL+R  S +
Sbjct: 1   MASAFTTMSSVGSLAAPGGRGMDKKLATSSDRLSSFASISSSSF-GRRQNVVLRRTRSPR 59

Query: 230 IKA-AKELYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV 406
           I A AK+LYFNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV
Sbjct: 60  INAMAKDLYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTV 119

Query: 407 AKEVELEDPVENIGAKLVRQAAAKTN 484
           AKEVELEDPVENIGAKLVRQAAAKTN
Sbjct: 120 AKEVELEDPVENIGAKLVRQAAAKTN 145


>ref|XP_002297617.1| predicted protein [Populus trichocarpa] gi|118486341|gb|ABK95011.1|
           unknown [Populus trichocarpa]
           gi|222844875|gb|EEE82422.1| predicted protein [Populus
           trichocarpa]
          Length = 607

 Score =  198 bits (503), Expect = 4e-49
 Identities = 112/145 (77%), Positives = 119/145 (82%), Gaps = 6/145 (4%)
 Frame = +2

Query: 68  MASTLTTMSSVGSVAATCSRATTDK------KLSSSSQISTVRFAGRRQNVVLQRRCSSK 229
           MAST T MSS G++AA  +RA   K      KLSS + IS  RF GR QNVVL R  S K
Sbjct: 1   MASTFTAMSSAGTLAAPNARALDKKFAFSSNKLSSFASISASRF-GRPQNVVLPRSRSLK 59

Query: 230 IKAAKELYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 409
           + AAKEL+FNKDGSAI+KLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
Sbjct: 60  VNAAKELHFNKDGSAIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 119

Query: 410 KEVELEDPVENIGAKLVRQAAAKTN 484
           KEVELEDPVENIGAKLVRQAAAKTN
Sbjct: 120 KEVELEDPVENIGAKLVRQAAAKTN 144


>ref|NP_001056601.1| Os06g0114000 [Oryza sativa Japonica Group]
           gi|7248401|dbj|BAA92724.1| putative chaperonin 60 beta
           precursor [Oryza sativa Japonica Group]
           gi|113594641|dbj|BAF18515.1| Os06g0114000 [Oryza sativa
           Japonica Group] gi|164375533|gb|ABY52934.1| RuBisCo
           subunit binding-protein beta subunit [Oryza sativa
           Japonica Group] gi|215715264|dbj|BAG95015.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 601

 Score =  197 bits (500), Expect = 9e-49
 Identities = 105/139 (75%), Positives = 117/139 (84%)
 Frame = +2

Query: 68  MASTLTTMSSVGSVAATCSRATTDKKLSSSSQISTVRFAGRRQNVVLQRRCSSKIKAAKE 247
           MAST    S+VG +AA      +DKK SS S +S+V  A R +N  LQR+C+ ++KAAKE
Sbjct: 1   MASTFGATSTVGLMAAPTG-IVSDKKPSSLSSVSSVSVASRPRNARLQRKCNFRVKAAKE 59

Query: 248 LYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELE 427
           LYFNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSP+IVNDGVTVA+EVELE
Sbjct: 60  LYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELE 119

Query: 428 DPVENIGAKLVRQAAAKTN 484
           DPVENIGAKLVRQAAAKTN
Sbjct: 120 DPVENIGAKLVRQAAAKTN 138


>ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|222841415|gb|EEE78962.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  197 bits (500), Expect = 9e-49
 Identities = 112/145 (77%), Positives = 117/145 (80%), Gaps = 6/145 (4%)
 Frame = +2

Query: 68  MASTLTTMSSVGSVAATCSRATTDK------KLSSSSQISTVRFAGRRQNVVLQRRCSSK 229
           MAST T MSSVG++AA   R    K      KLSS + IS  RF GR QNVVL R    K
Sbjct: 1   MASTFTAMSSVGTLAAPNGRVMDKKFVFSSNKLSSFASISASRF-GRPQNVVLPRSRPLK 59

Query: 230 IKAAKELYFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 409
           + AAKEL+FNKDGSAIKKLQ GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
Sbjct: 60  VNAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 119

Query: 410 KEVELEDPVENIGAKLVRQAAAKTN 484
           KEVELEDPVENIGAKLVRQAAAKTN
Sbjct: 120 KEVELEDPVENIGAKLVRQAAAKTN 144


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