BLASTX nr result

ID: Papaver23_contig00004705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004705
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]    82   6e-14
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]    81   8e-14
emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]    80   2e-13
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    78   8e-13
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...    76   2e-12

>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
          Length = 1287

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
 Frame = +1

Query: 118 KDPRT*KLVGIGRRVGRLYLLETLIVPQQSKNELTAAVA--NSFPSIVSPFMSWHSKLGH 291
           +DPRT + +  G RVGR++ +  L +P  +   +  A A  +S PS    F  WHS+LGH
Sbjct: 401 QDPRTGQELXTGPRVGRMFPVINLHLPPVAPVSIATAAAAVSSLPS----FALWHSRLGH 456

Query: 292 VCFSRLTYMINKGLLGTIQVDKEPYCISCKLGKQPALSFNN--SVTHSV 432
              SR+  ++++GLLG++  D   YC SC++GKQPAL FNN  S++HS+
Sbjct: 457 ASSSRVQQLVSRGLLGSVSKDIF-YCTSCQIGKQPALPFNNSESISHSI 504


>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
          Length = 1271

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
 Frame = +1

Query: 118 KDPRT*KLVGIGRRVGRLYLLETLIVPQQSKNELTAAVA--NSFPSIVSPFMSWHSKLGH 291
           +DPRT + +G G RVGR++ +  L +P  +   + AA A  +S PS+      WHS+LGH
Sbjct: 426 QDPRTGQELGTGPRVGRMFPVNNLHLPPVAPVSVAAATAAVSSLPSLAL----WHSRLGH 481

Query: 292 VCFSRLTYMINKGLLGTIQVDKEPYCISCKLGKQPALSFNNS 417
              SR+  ++++GLLG++  D    C SC+LGKQPAL FNNS
Sbjct: 482 APSSRVQQLVSRGLLGSVSKDNFD-CTSCQLGKQPALPFNNS 522


>emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
          Length = 1261

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
 Frame = +1

Query: 121 DPRT*KLVGIGRRVGRLYLLETLIVPQQSKNELTAAV--ANSFPSIVSPFMSWHSKLGHV 294
           DPRT + +G G RVGR++ +  L +P  +   +TAA    +S PS+      WHS+LGH 
Sbjct: 345 DPRTGQELGTGPRVGRMFPVNNLHLPPIAPVFVTAATPAVSSLPSLAL----WHSRLGHA 400

Query: 295 CFSRLTYMINKGLLGTIQVDKEPYCISCKLGKQPALSFNNS 417
             SR+  ++++GLLG++  D    C SC+LGKQPAL FNNS
Sbjct: 401 PSSRVQQLVSRGLLGSVSKDNFD-CTSCQLGKQPALPFNNS 440


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
 Frame = +1

Query: 124 PRT*KLVGIGRRVGRLYLLETLIVPQQSKNELTAAVANSF--PSIVSPFMSWHSKLGHVC 297
           P +  L+G GRR   LY+++ L +P+ S     +   +SF   S  S F SWHS+LGH+ 
Sbjct: 330 PXSQXLIGXGRRQEGLYVMDELRLPRVSNLAALSVDLSSFHLTSSSSXFYSWHSRLGHIS 389

Query: 298 FSRLTYMINKGLLGTIQVDKEPYCISCKLGKQPALSFNNSVT 423
              L Y+I+KG LG  Q     YC  CKL K  AL FN SV+
Sbjct: 390 APHLKYLISKGFLGNFQTHDISYCSGCKLAKFSALLFNQSVS 431


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group] gi|78708691|gb|ABB47666.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
 Frame = +1

Query: 112 FSKDPRT*KLVGIGRRVGR---LYLLETLIVPQQSKNELTAAVANSFPSIVSP------- 261
           F +D  T  ++G G R  R   LY+L++L +P  S N          PS+ SP       
Sbjct: 270 FVQDRHTGAVIGTGHRQKRSCGLYILDSLSLPSSSTNT---------PSVYSPMCSTACK 320

Query: 262 -FMSWHSKLGHVCFSRLTYMINKGLLGTIQVDKEPYCISCKLGKQPALSFNNSVTHS 429
            F  WH +LGH+C SRL  +IN+G+LG++ VD    C  CKLGKQ  L + +S + S
Sbjct: 321 SFPQWHHRLGHLCGSRLATLINQGVLGSVPVDTTFVCKGCKLGKQVQLPYPSSTSRS 377


Top