BLASTX nr result

ID: Papaver23_contig00004694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004694
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylv...   174   3e-41
emb|CBI15119.3| unnamed protein product [Vitis vinifera]              172   2e-40
ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256...   172   2e-40
emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]   172   2e-40
ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [...   169   1e-39

>dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
           gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich
           protein [Nicotiana tabacum]
          Length = 259

 Score =  174 bits (442), Expect = 3e-41
 Identities = 82/124 (66%), Positives = 108/124 (87%)
 Frame = +2

Query: 158 MAFMSKVGNLLRQSVSKNINSDLCGSNPSIFQAIRSMSSSKVFVGGLSWNTDETSLRQAF 337
           MAF++K+GN+L+Q VS++ N +LC S  S++QAIRSMSSSK+FVGGLSW TDETSL++AF
Sbjct: 1   MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLKEAF 60

Query: 338 ADCGEIIDARVIMDRDSGRSRGFGFVTYTSTEEASKAISTLDGQNVDGRTVRVNYATERA 517
           +  GE+I+ARVIMDRD+GRSRGFGFV++TSTEEA+ A++ LDGQ++ GR +RVNYATE+ 
Sbjct: 61  SQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEKL 120

Query: 518 PRSF 529
             SF
Sbjct: 121 RGSF 124


>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  172 bits (435), Expect = 2e-40
 Identities = 84/120 (70%), Positives = 104/120 (86%)
 Frame = +2

Query: 158 MAFMSKVGNLLRQSVSKNINSDLCGSNPSIFQAIRSMSSSKVFVGGLSWNTDETSLRQAF 337
           MAF  KVGN+LRQ+VSK +NS    SNPSI+QAIR MSSSK+F+GGLS++TD+TSLR+AF
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 338 ADCGEIIDARVIMDRDSGRSRGFGFVTYTSTEEASKAISTLDGQNVDGRTVRVNYATERA 517
              GE+I+ARVI+DR++GRSRGFGFVT+TS+EEAS AI  LDGQ++ GR VRVNYAT+RA
Sbjct: 61  HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120


>ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
          Length = 277

 Score =  172 bits (435), Expect = 2e-40
 Identities = 84/120 (70%), Positives = 104/120 (86%)
 Frame = +2

Query: 158 MAFMSKVGNLLRQSVSKNINSDLCGSNPSIFQAIRSMSSSKVFVGGLSWNTDETSLRQAF 337
           MAF  KVGN+LRQ+VSK +NS    SNPSI+QAIR MSSSK+F+GGLS++TD+TSLR+AF
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 338 ADCGEIIDARVIMDRDSGRSRGFGFVTYTSTEEASKAISTLDGQNVDGRTVRVNYATERA 517
              GE+I+ARVI+DR++GRSRGFGFVT+TS+EEAS AI  LDGQ++ GR VRVNYAT+RA
Sbjct: 61  HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120


>emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
          Length = 272

 Score =  172 bits (435), Expect = 2e-40
 Identities = 84/120 (70%), Positives = 104/120 (86%)
 Frame = +2

Query: 158 MAFMSKVGNLLRQSVSKNINSDLCGSNPSIFQAIRSMSSSKVFVGGLSWNTDETSLRQAF 337
           MAF  KVGN+LRQ+VSK +NS    SNPSI+QAIR MSSSK+F+GGLS++TD+TSLR+AF
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60

Query: 338 ADCGEIIDARVIMDRDSGRSRGFGFVTYTSTEEASKAISTLDGQNVDGRTVRVNYATERA 517
              GE+I+ARVI+DR++GRSRGFGFVT+TS+EEAS AI  LDGQ++ GR VRVNYAT+RA
Sbjct: 61  YKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120


>ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 267

 Score =  169 bits (429), Expect = 1e-39
 Identities = 84/124 (67%), Positives = 104/124 (83%)
 Frame = +2

Query: 158 MAFMSKVGNLLRQSVSKNINSDLCGSNPSIFQAIRSMSSSKVFVGGLSWNTDETSLRQAF 337
           MAF+SKVGNLLRQ+ +K I+++L  S PS+FQAIR MSSSKVFVGG+S+ TD+TSLR+AF
Sbjct: 1   MAFLSKVGNLLRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAF 60

Query: 338 ADCGEIIDARVIMDRDSGRSRGFGFVTYTSTEEASKAISTLDGQNVDGRTVRVNYATERA 517
              GE+I+ARVI+DR++GRSRGF FVTYTS+EEAS AI  LDGQ++ GR VRVNYA +R 
Sbjct: 61  GKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRP 120

Query: 518 PRSF 529
             SF
Sbjct: 121 RTSF 124


Top