BLASTX nr result

ID: Papaver23_contig00004682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004682
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554103.1| PREDICTED: psbP domain-containing protein 6,...   322   8e-86
ref|XP_002307956.1| predicted protein [Populus trichocarpa] gi|2...   322   1e-85
ref|XP_002283307.1| PREDICTED: psbP domain-containing protein 6,...   322   1e-85
ref|XP_002876377.1| thylakoid lumenal 20 kDa protein [Arabidopsi...   321   2e-85
ref|XP_002526199.1| Thylakoid lumenal 29.8 kDa protein, chloropl...   318   1e-84

>ref|XP_003554103.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  322 bits (826), Expect = 8e-86
 Identities = 164/249 (65%), Positives = 194/249 (77%)
 Frame = +1

Query: 217 TNSSSTKLLSVSTGNGNANQDTGTERRRREFMAAIGLISINFNLWLNQKPIADAREIEVG 396
           ++SSS   +  S      +Q T     RREF+  +  +     + L + P +DARE+EVG
Sbjct: 16  SSSSSLHAIRASASEYVPSQHT----LRREFLKGVAALMPLPLVVLIEPPPSDAREVEVG 71

Query: 397 XXXXXXXXXXXXXXXKASSKDTPALRAGNVQPYNFIIPPSWKQTRVANILSGNYCQPKCA 576
                          KAS+KDTPALRAGNVQPY FI+PP+WKQ RVANILSGNYCQPKCA
Sbjct: 72  SFLPPSPSDPSFVLFKASAKDTPALRAGNVQPYKFILPPTWKQARVANILSGNYCQPKCA 131

Query: 577 EPWVEVKFENEMQGKIQVVASPLVRLTNKLTATIEEIGTPEKLIASLGPFVTGNTLDSDE 756
           EPWVEVKFE+E QGK+QVVASPL+RLTNK  ATIE+IG+PEKLIASLGPFVTGNT D +E
Sbjct: 132 EPWVEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEKLIASLGPFVTGNTFDPEE 191

Query: 757 IVETTVEKQGDQTYYKYELETPFALTGTHNLAKATAKGNTVILFVVSASDKQWQASQKTL 936
           ++ET+VEK GDQTYYKY LETP+ALTGTHNLAKATAKGNTV+LFVVSA+DKQWQ S++TL
Sbjct: 192 LLETSVEKLGDQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVVSANDKQWQTSEETL 251

Query: 937 KAILDSFEV 963
           KA+L+SFEV
Sbjct: 252 KAVLNSFEV 260


>ref|XP_002307956.1| predicted protein [Populus trichocarpa] gi|222853932|gb|EEE91479.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  322 bits (825), Expect = 1e-85
 Identities = 162/245 (66%), Positives = 192/245 (78%)
 Frame = +1

Query: 229 STKLLSVSTGNGNANQDTGTERRRREFMAAIGLISINFNLWLNQKPIADAREIEVGXXXX 408
           +++  +++T   + +Q       RR+ +  + L  +   + +   P ++AREIEVG    
Sbjct: 16  TSRTTTLTTTTTSLDQHRNQVVLRRQILKGLVLSPL---ILIKAPPSSEAREIEVGSYLP 72

Query: 409 XXXXXXXXXXXKASSKDTPALRAGNVQPYNFIIPPSWKQTRVANILSGNYCQPKCAEPWV 588
                      KASSKDTPALRAGNVQPY FI+PPSWKQTRVANILSGNYCQPKCAEPWV
Sbjct: 73  PSPTDPSFVLFKASSKDTPALRAGNVQPYQFILPPSWKQTRVANILSGNYCQPKCAEPWV 132

Query: 589 EVKFENEMQGKIQVVASPLVRLTNKLTATIEEIGTPEKLIASLGPFVTGNTLDSDEIVET 768
           EVKFE+E QGK+QVVASPL+RLTNK  ATIEEIG PEKLIASLGPFVTGN+ D DE++ET
Sbjct: 133 EVKFEDEKQGKVQVVASPLIRLTNKPNATIEEIGNPEKLIASLGPFVTGNSYDPDELLET 192

Query: 769 TVEKQGDQTYYKYELETPFALTGTHNLAKATAKGNTVILFVVSASDKQWQASQKTLKAIL 948
            +EK GDQTYYKY LETPFALTGTHNLAKATAKG+TV+LFV SA+DKQWQAS+KTLKAIL
Sbjct: 193 KIEKFGDQTYYKYMLETPFALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKTLKAIL 252

Query: 949 DSFEV 963
           DSF++
Sbjct: 253 DSFQI 257


>ref|XP_002283307.1| PREDICTED: psbP domain-containing protein 6, chloroplastic [Vitis
           vinifera] gi|297741687|emb|CBI32819.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  322 bits (825), Expect = 1e-85
 Identities = 168/256 (65%), Positives = 202/256 (78%), Gaps = 1/256 (0%)
 Frame = +1

Query: 199 ISNGSVTNSSSTKLLSVSTGNGNANQDTGTERRRREFMAAIGLISINFNLWLNQKPI-AD 375
           +S+ S + S+++ L   S    + NQ T     RREF+  + L  + F   ++++ + A 
Sbjct: 16  LSHISSSKSATSILPHSSPFKNSPNQLTF----RREFLKGLALAPLIF---ISEEALPAH 68

Query: 376 AREIEVGXXXXXXXXXXXXXXXKASSKDTPALRAGNVQPYNFIIPPSWKQTRVANILSGN 555
           ARE+EVG               KAS KDTPALRAGNVQPY F++PP+WKQTRVANILSGN
Sbjct: 69  AREVEVGSYLPTSPSDPSFVLFKASPKDTPALRAGNVQPYQFVLPPTWKQTRVANILSGN 128

Query: 556 YCQPKCAEPWVEVKFENEMQGKIQVVASPLVRLTNKLTATIEEIGTPEKLIASLGPFVTG 735
           YCQPKCAEPWVEVKFE+E QGK+QVVASPL+RLTNK  A+IE+IG+PEKLIASLGPFVTG
Sbjct: 129 YCQPKCAEPWVEVKFEDENQGKVQVVASPLIRLTNKPNASIEDIGSPEKLIASLGPFVTG 188

Query: 736 NTLDSDEIVETTVEKQGDQTYYKYELETPFALTGTHNLAKATAKGNTVILFVVSASDKQW 915
           NT DSDE++ET+VEK GDQTYYKY LETPFALTG+HNLAKATAKGN+V+LFV SA+DKQW
Sbjct: 189 NTYDSDELLETSVEKLGDQTYYKYVLETPFALTGSHNLAKATAKGNSVVLFVASANDKQW 248

Query: 916 QASQKTLKAILDSFEV 963
           QASQKTLKA+LDSF+V
Sbjct: 249 QASQKTLKAMLDSFQV 264


>ref|XP_002876377.1| thylakoid lumenal 20 kDa protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322215|gb|EFH52636.1| thylakoid lumenal 20 kDa
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  321 bits (823), Expect = 2e-85
 Identities = 159/248 (64%), Positives = 194/248 (78%)
 Frame = +1

Query: 220 NSSSTKLLSVSTGNGNANQDTGTERRRREFMAAIGLISINFNLWLNQKPIADAREIEVGX 399
           +S  + L+   TG   A+     + RRRE +     ++I   L L + PI++ARE+EVG 
Sbjct: 16  SSKCSALIKARTGVVVASAQQQQQPRRRELLLK-SAVAIPAILQLKEAPISEAREVEVGS 74

Query: 400 XXXXXXXXXXXXXXKASSKDTPALRAGNVQPYNFIIPPSWKQTRVANILSGNYCQPKCAE 579
                         KA   DTPALRAGNVQPY F++PP+WKQ R+ANILSGNYCQPKCAE
Sbjct: 75  YLPPSPSDPSFVLFKAKPSDTPALRAGNVQPYQFVLPPNWKQLRIANILSGNYCQPKCAE 134

Query: 580 PWVEVKFENEMQGKIQVVASPLVRLTNKLTATIEEIGTPEKLIASLGPFVTGNTLDSDEI 759
           PW+EVKFENE QGK+QVVASPL+RLTNK  ATIE+IG PEK+IASLGPFVTGN+ DSDE+
Sbjct: 135 PWIEVKFENEKQGKVQVVASPLIRLTNKPNATIEDIGEPEKVIASLGPFVTGNSYDSDEL 194

Query: 760 VETTVEKQGDQTYYKYELETPFALTGTHNLAKATAKGNTVILFVVSASDKQWQASQKTLK 939
           ++T++EK GDQTYYKY LETPFALTG+HNLAKATAKGNTV+LFVVSA++KQWQ+SQKTL+
Sbjct: 195 LKTSIEKIGDQTYYKYVLETPFALTGSHNLAKATAKGNTVVLFVVSATEKQWQSSQKTLE 254

Query: 940 AILDSFEV 963
           AILDSF++
Sbjct: 255 AILDSFQL 262


>ref|XP_002526199.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534477|gb|EEF36178.1| Thylakoid
           lumenal 29.8 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 260

 Score =  318 bits (816), Expect = 1e-84
 Identities = 156/222 (70%), Positives = 183/222 (82%)
 Frame = +1

Query: 298 RREFMAAIGLISINFNLWLNQKPIADAREIEVGXXXXXXXXXXXXXXXKASSKDTPALRA 477
           RR+ +  I +  +   + + + PI++A+E+EVG               KAS KDTPALRA
Sbjct: 42  RRQILKGIAVSPL---ILIKEAPISEAKEVEVGSYLPSSPSDPSFVLFKASPKDTPALRA 98

Query: 478 GNVQPYNFIIPPSWKQTRVANILSGNYCQPKCAEPWVEVKFENEMQGKIQVVASPLVRLT 657
           GNVQPY FI+PP+WKQ RVANILSGNYCQPKCAEPWVEVKFE+E QGK+QVVASPL+RLT
Sbjct: 99  GNVQPYQFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLT 158

Query: 658 NKLTATIEEIGTPEKLIASLGPFVTGNTLDSDEIVETTVEKQGDQTYYKYELETPFALTG 837
           NK  ATIEEIGTPEKLIASLGPFVTGN+ D DE++ET++EK GDQTYYKY LETP+ALTG
Sbjct: 159 NKPNATIEEIGTPEKLIASLGPFVTGNSYDPDELLETSIEKLGDQTYYKYVLETPYALTG 218

Query: 838 THNLAKATAKGNTVILFVVSASDKQWQASQKTLKAILDSFEV 963
           THNLAKATAKG+TV+LFV SA+DKQWQAS+KTLKAI+DSF V
Sbjct: 219 THNLAKATAKGSTVVLFVASANDKQWQASEKTLKAIIDSFIV 260


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