BLASTX nr result

ID: Papaver23_contig00004637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004637
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...   338   1e-90
ref|NP_180288.1| P-loop containing nucleoside triphosphate hydro...   331   1e-88
ref|XP_002879073.1| GTP-binding family protein [Arabidopsis lyra...   330   3e-88
ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [C...   327   2e-87
ref|XP_002889691.1| GTP-binding family protein [Arabidopsis lyra...   327   3e-87

>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score =  338 bits (866), Expect = 1e-90
 Identities = 167/248 (67%), Positives = 193/248 (77%)
 Frame = +3

Query: 120 MGKNEKTSLGRALVKHHNQMVQQIKEKGRYYRKQENKVLESVTEVTXXXXXXXXXXXXXR 299
           MGKNEKT LGRALVKHHNQM+QQ  EKGR+Y+ Q  KVLES+T+V              R
Sbjct: 1   MGKNEKTGLGRALVKHHNQMLQQSNEKGRFYKNQHKKVLESITDVNDIDAVIQEADEAQR 60

Query: 300 LYTHDNPTPKFLINLDTNANENNEIMTPXXXXXXXXXXXXIHAGSLQVPRRPPWYPGMEV 479
           L+  D+P P  LINLDTNA+ +N  MT             +HA SL+VPRRPPW  GM  
Sbjct: 61  LFAFDHPAPNVLINLDTNASTSN--MTDEERREQQKKEEALHASSLRVPRRPPWNVGMTA 118

Query: 480 DQLDFNEKQAFLIWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARD 659
           ++LD NE+QA LIWRR LA LE NE LVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARD
Sbjct: 119 EELDANERQALLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARD 178

Query: 660 PLFYRCPDLEAYAREIDEHKETMLLVNKADLLPLAVRDKWAKYFQDNGILYLFWSAKAAT 839
           PLFYRCPDLEAYA+EIDEHK+T+LLVNKADLLP +VR++WAKYF+ +GIL++FWSAKAA+
Sbjct: 179 PLFYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRERWAKYFRLHGILFIFWSAKAAS 238

Query: 840 AAVEGKPL 863
           AA+EGK L
Sbjct: 239 AALEGKKL 246


>ref|NP_180288.1| P-loop containing nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana] gi|4646218|gb|AAD26884.1|
           putative nucleotide-binding protein [Arabidopsis
           thaliana] gi|63003826|gb|AAY25442.1| At2g27200
           [Arabidopsis thaliana] gi|330252858|gb|AEC07952.1|
           P-loop containing nucleoside triphosphate hydrolase-like
           protein [Arabidopsis thaliana]
          Length = 537

 Score =  331 bits (848), Expect = 1e-88
 Identities = 170/250 (68%), Positives = 193/250 (77%), Gaps = 2/250 (0%)
 Frame = +3

Query: 120 MGKNEKTSLGRALVKHHNQMVQQIKEKGRYYRKQENKVLESVTEVTXXXXXXXXXXXXXR 299
           MGKNEKTSLGRALVKHHN M+Q+ KEKG+ Y+ Q  KVLESVTEV+             R
Sbjct: 1   MGKNEKTSLGRALVKHHNHMIQETKEKGKSYKDQHKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 300 LYT--HDNPTPKFLINLDTNANENNEIMTPXXXXXXXXXXXXIHAGSLQVPRRPPWYPGM 473
           L+   HD+ TP   IN+DT ++ +   +T             +HA SLQVPRRP W P M
Sbjct: 61  LFAIHHDSATP-VPINMDTGSSSSG--ITAKEWKEQRMREEALHASSLQVPRRPHWTPKM 117

Query: 474 EVDQLDFNEKQAFLIWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDA 653
            V++LD NEKQAFL WRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDL+VMVVDA
Sbjct: 118 NVEKLDANEKQAFLTWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDA 177

Query: 654 RDPLFYRCPDLEAYAREIDEHKETMLLVNKADLLPLAVRDKWAKYFQDNGILYLFWSAKA 833
           RDPLFYRCPDLEAYA+EIDEHK+TMLLVNKADLLP  VR+KWA+YF  N IL++FWSAKA
Sbjct: 178 RDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREKWAEYFSRNNILFVFWSAKA 237

Query: 834 ATAAVEGKPL 863
           ATA +EGKPL
Sbjct: 238 ATATLEGKPL 247


>ref|XP_002879073.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324912|gb|EFH55332.1| GTP-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 539

 Score =  330 bits (845), Expect = 3e-88
 Identities = 169/250 (67%), Positives = 192/250 (76%), Gaps = 2/250 (0%)
 Frame = +3

Query: 120 MGKNEKTSLGRALVKHHNQMVQQIKEKGRYYRKQENKVLESVTEVTXXXXXXXXXXXXXR 299
           MGKNEKTSLGRALVKHHN M+Q+ KEKG+ Y+ Q  KVLESVTEV+             R
Sbjct: 1   MGKNEKTSLGRALVKHHNHMIQETKEKGKSYKDQHKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 300 LYT--HDNPTPKFLINLDTNANENNEIMTPXXXXXXXXXXXXIHAGSLQVPRRPPWYPGM 473
           L+   HD+ TP   IN+DT ++ +   +T             +HA SLQVPRRP W P M
Sbjct: 61  LFAIHHDSATP-VPINMDTGSSSSG--ITAKEWKEQRMREEALHASSLQVPRRPHWTPKM 117

Query: 474 EVDQLDFNEKQAFLIWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDA 653
            V+QLD NE+QAFL WRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDL+VMVVDA
Sbjct: 118 NVEQLDANERQAFLTWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDA 177

Query: 654 RDPLFYRCPDLEAYAREIDEHKETMLLVNKADLLPLAVRDKWAKYFQDNGILYLFWSAKA 833
           RDPLFYRCPDLEAYA+EIDEHK+TMLLVNKADLLP   R+KWA+YF  N IL++FWSAKA
Sbjct: 178 RDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYAREKWAEYFSRNNILFVFWSAKA 237

Query: 834 ATAAVEGKPL 863
           ATA +EGKPL
Sbjct: 238 ATATLEGKPL 247


>ref|XP_004146392.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 588

 Score =  327 bits (839), Expect = 2e-87
 Identities = 162/248 (65%), Positives = 190/248 (76%)
 Frame = +3

Query: 120 MGKNEKTSLGRALVKHHNQMVQQIKEKGRYYRKQENKVLESVTEVTXXXXXXXXXXXXXR 299
           MGKN+K  LGRALVK HNQM+QQ KEKGR+Y+ Q+ KVLESVTEV+             R
Sbjct: 1   MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60

Query: 300 LYTHDNPTPKFLINLDTNANENNEIMTPXXXXXXXXXXXXIHAGSLQVPRRPPWYPGMEV 479
           L++ DNPTP FLINLD +++ +   MTP            +HA SL+VPRRPPW   M  
Sbjct: 61  LFSIDNPTPNFLINLDGSSSISE--MTPAERREQQKIEEALHASSLRVPRRPPWNARMSA 118

Query: 480 DQLDFNEKQAFLIWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARD 659
           ++LD NE+Q+FLIWRR LA LEENE LVLTPFEKNLDIWRQLWRV+ER DLLVMVVDARD
Sbjct: 119 EELDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARD 178

Query: 660 PLFYRCPDLEAYAREIDEHKETMLLVNKADLLPLAVRDKWAKYFQDNGILYLFWSAKAAT 839
           PLFYRCPDLEAYARE+D+HK TMLLVNKADLL  +VR KWA++F  + ILYLFWSAKAA+
Sbjct: 179 PLFYRCPDLEAYAREVDQHKRTMLLVNKADLLSYSVRKKWAEFFSQHDILYLFWSAKAAS 238

Query: 840 AAVEGKPL 863
           A ++GK L
Sbjct: 239 ATLDGKKL 246


>ref|XP_002889691.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335533|gb|EFH65950.1| GTP-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score =  327 bits (837), Expect = 3e-87
 Identities = 166/248 (66%), Positives = 192/248 (77%), Gaps = 2/248 (0%)
 Frame = +3

Query: 120 MGKNEKTSLGRALVKHHNQMVQQIKEKGRYYRKQENKVLESVTEVTXXXXXXXXXXXXXR 299
           MGK+EKTSLGR+LVKHHN M+Q+ K+KG+YY+  + KVLESVTEV+             R
Sbjct: 1   MGKSEKTSLGRSLVKHHNHMIQESKDKGKYYKNLQKKVLESVTEVSDIDAIIEQAEEAER 60

Query: 300 LYT--HDNPTPKFLINLDTNANENNEIMTPXXXXXXXXXXXXIHAGSLQVPRRPPWYPGM 473
           LYT  H + TP   INLDTN++ +  ++ P            +HA SLQVPRRPPW P M
Sbjct: 61  LYTINHSSSTP-LSINLDTNSSSS--VIAPEEWREQQKIEEALHASSLQVPRRPPWTPEM 117

Query: 474 EVDQLDFNEKQAFLIWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDA 653
            V++LD NEKQAFL WRR L SLEENEKLVLTPFEKNLDIWRQLWRVLERSDL+VMVVDA
Sbjct: 118 SVEELDANEKQAFLNWRRMLVSLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDA 177

Query: 654 RDPLFYRCPDLEAYAREIDEHKETMLLVNKADLLPLAVRDKWAKYFQDNGILYLFWSAKA 833
           RDPLFYRCPDLEAYAREIDEHK+ MLLVNKADLLP  VR+KWA+YF+ N IL++FWSA A
Sbjct: 178 RDPLFYRCPDLEAYAREIDEHKKIMLLVNKADLLPTDVREKWAEYFRLNNILFVFWSAIA 237

Query: 834 ATAAVEGK 857
           ATA +EGK
Sbjct: 238 ATATLEGK 245


Top