BLASTX nr result

ID: Papaver23_contig00004621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004621
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus...   228   2e-57
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ...   226   7e-57
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ...   226   7e-57
ref|XP_003604015.1| hypothetical protein MTR_3g117600 [Medicago ...   224   4e-56
ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|2...   221   3e-55

>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
           gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
           putative [Ricinus communis]
          Length = 221

 Score =  228 bits (582), Expect = 2e-57
 Identities = 122/177 (68%), Positives = 143/177 (80%), Gaps = 9/177 (5%)
 Frame = +1

Query: 232 QRKSNQMKTQTHTSFSFVSKPS--NRH-------SILKCMAHPRRVKMVAKQIQREISDM 384
           QR S  + T  H  F   +  S  + H       + +KCMA+PRRVKMVAKQIQRE+SDM
Sbjct: 18  QRNSPPITTILHNPFPIWTPKSAASAHLRQKPFINTIKCMANPRRVKMVAKQIQRELSDM 77

Query: 385 LLTDNVLQFAILPEAELGADRYLSSLTTVSDVEVSPDLQVVKVYVSVFGDERGREVALAG 564
           LLTD VLQ+AILPEA LGAD+YLSSLTT+SDVEVS DLQVVKVYVSVFGD+RG+EVA+AG
Sbjct: 78  LLTDKVLQYAILPEAALGADKYLSSLTTISDVEVSTDLQVVKVYVSVFGDDRGKEVAIAG 137

Query: 565 LKAKSKYVRGQLGRRMKLRLTPEVRFIEDESLERGSRVIAILDKLKNDKEVVEGQEE 735
           LKAK+KYVR +LGRRMKLRLTPE+RFIEDES ERGSRV+AILDK+K +KE    ++E
Sbjct: 138 LKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERGSRVLAILDKIKAEKENTGSEDE 194


>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 215

 Score =  226 bits (577), Expect = 7e-57
 Identities = 111/141 (78%), Positives = 133/141 (94%)
 Frame = +1

Query: 313 LKCMAHPRRVKMVAKQIQREISDMLLTDNVLQFAILPEAELGADRYLSSLTTVSDVEVSP 492
           ++CMA+ RRVKMVAKQI+RE+SDMLLTD VLQFA+LPEA LGADRYLSSLTT+SDVEVS 
Sbjct: 55  VRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSA 114

Query: 493 DLQVVKVYVSVFGDERGREVALAGLKAKSKYVRGQLGRRMKLRLTPEVRFIEDESLERGS 672
           DLQVVKVYVSVFGDE+G+EVA+AGLK+K+KYVR +LGRRMKLRLTPE+RF+EDESLERGS
Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174

Query: 673 RVIAILDKLKNDKEVVEGQEE 735
           RVIAILD++KN+K++   Q++
Sbjct: 175 RVIAILDRIKNEKKMAGSQDQ 195


>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 223

 Score =  226 bits (577), Expect = 7e-57
 Identities = 111/141 (78%), Positives = 133/141 (94%)
 Frame = +1

Query: 313 LKCMAHPRRVKMVAKQIQREISDMLLTDNVLQFAILPEAELGADRYLSSLTTVSDVEVSP 492
           ++CMA+ RRVKMVAKQI+RE+SDMLLTD VLQFA+LPEA LGADRYLSSLTT+SDVEVS 
Sbjct: 55  VRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSA 114

Query: 493 DLQVVKVYVSVFGDERGREVALAGLKAKSKYVRGQLGRRMKLRLTPEVRFIEDESLERGS 672
           DLQVVKVYVSVFGDE+G+EVA+AGLK+K+KYVR +LGRRMKLRLTPE+RF+EDESLERGS
Sbjct: 115 DLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGS 174

Query: 673 RVIAILDKLKNDKEVVEGQEE 735
           RVIAILD++KN+K++   Q++
Sbjct: 175 RVIAILDRIKNEKKMAGSQDQ 195


>ref|XP_003604015.1| hypothetical protein MTR_3g117600 [Medicago truncatula]
           gi|355493063|gb|AES74266.1| hypothetical protein
           MTR_3g117600 [Medicago truncatula]
          Length = 229

 Score =  224 bits (570), Expect = 4e-56
 Identities = 113/153 (73%), Positives = 134/153 (87%), Gaps = 1/153 (0%)
 Frame = +1

Query: 256 TQTHTSFSFVSKPSNRHSI-LKCMAHPRRVKMVAKQIQREISDMLLTDNVLQFAILPEAE 432
           T T T F       N   I +KCMA+PRRVKMVAKQI+RE+SDML+TDNVLQFA+LPEA 
Sbjct: 31  TATVTIFQTQRLTGNASRITIKCMANPRRVKMVAKQIRRELSDMLITDNVLQFAVLPEAS 90

Query: 433 LGADRYLSSLTTVSDVEVSPDLQVVKVYVSVFGDERGREVALAGLKAKSKYVRGQLGRRM 612
           LGAD YLSS+TT++DVE++ DLQV +VYVSVFGDERG+EVA+AGLK+K+KYVRG+LGRRM
Sbjct: 91  LGADLYLSSVTTITDVEITADLQVARVYVSVFGDERGKEVAMAGLKSKAKYVRGELGRRM 150

Query: 613 KLRLTPEVRFIEDESLERGSRVIAILDKLKNDK 711
           KLRLTPE+RF+EDES ERGSRVIAILDK+KN+K
Sbjct: 151 KLRLTPEIRFLEDESFERGSRVIAILDKIKNEK 183


>ref|XP_002306146.1| predicted protein [Populus trichocarpa] gi|222849110|gb|EEE86657.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  221 bits (563), Expect = 3e-55
 Identities = 111/136 (81%), Positives = 127/136 (93%)
 Frame = +1

Query: 322 MAHPRRVKMVAKQIQREISDMLLTDNVLQFAILPEAELGADRYLSSLTTVSDVEVSPDLQ 501
           MA+PRRVKMVAKQIQRE+SDMLLTD VLQ+A+LPEA LGAD+YLSSLTT+SDVEVS DLQ
Sbjct: 1   MANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQ 60

Query: 502 VVKVYVSVFGDERGREVALAGLKAKSKYVRGQLGRRMKLRLTPEVRFIEDESLERGSRVI 681
           VVKVYVSVFGD+RG+EVA+AGLK+K+KYVR QLGRRMKLRLTPE+RFIEDE LERGSRVI
Sbjct: 61  VVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGLERGSRVI 120

Query: 682 AILDKLKNDKEVVEGQ 729
           AILD++K +K+  E Q
Sbjct: 121 AILDRIKAEKDNAESQ 136


Top