BLASTX nr result

ID: Papaver23_contig00004550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004550
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein ...   186   5e-45
ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [P...   184   2e-44
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   183   3e-44
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   182   6e-44
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   182   6e-44

>ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein CP24 [Medicago
           truncatula] gi|355482225|gb|AES63428.1| Chloroplast
           chlorophyll a/b-binding protein CP24 [Medicago
           truncatula]
          Length = 261

 Score =  186 bits (471), Expect = 5e-45
 Identities = 86/95 (90%), Positives = 93/95 (97%)
 Frame = -2

Query: 713 FFNPESQSVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 534
           FFNP+SQS+EWATPWS+TAENFANATGEQGYPGGKFFDPLS AGTI+NGVY+PDTEKLER
Sbjct: 167 FFNPDSQSIEWATPWSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLER 226

Query: 533 LKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGFLGL 429
           LKLAEIKH+RLAM+AMLIFYFEAGQGKTPLG LGL
Sbjct: 227 LKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 261


>ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
           gi|118487218|gb|ABK95437.1| unknown [Populus
           trichocarpa] gi|118489807|gb|ABK96703.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222840592|gb|EEE78139.1| light-harvesting complex II
           protein Lhcb6 [Populus trichocarpa]
          Length = 257

 Score =  184 bits (467), Expect = 2e-44
 Identities = 85/95 (89%), Positives = 92/95 (96%)
 Frame = -2

Query: 713 FFNPESQSVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 534
           FFNPESQSVEWATPWS+TAENFANATG+QGYPGGKFFDPL FAGT++NGVY+PD EKLER
Sbjct: 163 FFNPESQSVEWATPWSKTAENFANATGDQGYPGGKFFDPLGFAGTLKNGVYIPDEEKLER 222

Query: 533 LKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGFLGL 429
           LKLAEIKH+RLAM+AMLIFYFEAGQGKTPLG LGL
Sbjct: 223 LKLAEIKHARLAMIAMLIFYFEAGQGKTPLGALGL 257


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  183 bits (464), Expect = 3e-44
 Identities = 84/95 (88%), Positives = 93/95 (97%)
 Frame = -2

Query: 713 FFNPESQSVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 534
           FFNP+SQSVEWATPWS+TAENFANATGEQGYPGGKFFDPL FAGT+++GVY+PDTEKLER
Sbjct: 164 FFNPDSQSVEWATPWSKTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLER 223

Query: 533 LKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGFLGL 429
           LKLAEIKH+R+AM+AMLIFYFEAGQGKTPLG LGL
Sbjct: 224 LKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
           [Vitis vinifera] gi|147804704|emb|CAN71620.1|
           hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  182 bits (462), Expect = 6e-44
 Identities = 85/95 (89%), Positives = 92/95 (96%)
 Frame = -2

Query: 713 FFNPESQSVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 534
           FFNPESQSVEWATPWS+TAENFANATGEQGYPGGKFFDPLS AGTI++GVY+PD EKLER
Sbjct: 163 FFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLER 222

Query: 533 LKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGFLGL 429
           LKLAEIKH+R+AM+AMLIFYFEAGQGKTPLG LGL
Sbjct: 223 LKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 257


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  182 bits (462), Expect = 6e-44
 Identities = 85/95 (89%), Positives = 92/95 (96%)
 Frame = -2

Query: 713 FFNPESQSVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 534
           FFNPESQSVEWATPWS+TAENFAN TGEQGYPGGKFFDPLS AGT+Q+GVY+PDTEKLER
Sbjct: 163 FFNPESQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLER 222

Query: 533 LKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGFLGL 429
           LK+AEIKH+RLAM+AMLIFYFEAGQGKTPLG LGL
Sbjct: 223 LKVAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 257


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