BLASTX nr result

ID: Papaver23_contig00004549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004549
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein ...   149   6e-34
ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [P...   147   2e-33
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   146   4e-33
dbj|BAI52949.1| light-harvesting complex II protein [Citrullus l...   145   7e-33
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   145   7e-33

>ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein CP24 [Medicago
           truncatula] gi|355482225|gb|AES63428.1| Chloroplast
           chlorophyll a/b-binding protein CP24 [Medicago
           truncatula]
          Length = 261

 Score =  149 bits (376), Expect = 6e-34
 Identities = 67/76 (88%), Positives = 75/76 (98%)
 Frame = +2

Query: 2   FFNPESQAVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 181
           FFNP+SQ++EWATPWS+TAENFANATGEQGYPGGKFFDPLS AGTI+NGVY+PDTEKLER
Sbjct: 167 FFNPDSQSIEWATPWSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLER 226

Query: 182 LKLAEIKHSRLAMVAM 229
           LKLAEIKH+RLAM+AM
Sbjct: 227 LKLAEIKHARLAMLAM 242


>ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
           gi|118487218|gb|ABK95437.1| unknown [Populus
           trichocarpa] gi|118489807|gb|ABK96703.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222840592|gb|EEE78139.1| light-harvesting complex II
           protein Lhcb6 [Populus trichocarpa]
          Length = 257

 Score =  147 bits (372), Expect = 2e-33
 Identities = 66/76 (86%), Positives = 74/76 (97%)
 Frame = +2

Query: 2   FFNPESQAVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 181
           FFNPESQ+VEWATPWS+TAENFANATG+QGYPGGKFFDPL FAGT++NGVY+PD EKLER
Sbjct: 163 FFNPESQSVEWATPWSKTAENFANATGDQGYPGGKFFDPLGFAGTLKNGVYIPDEEKLER 222

Query: 182 LKLAEIKHSRLAMVAM 229
           LKLAEIKH+RLAM+AM
Sbjct: 223 LKLAEIKHARLAMIAM 238


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  146 bits (369), Expect = 4e-33
 Identities = 65/76 (85%), Positives = 75/76 (98%)
 Frame = +2

Query: 2   FFNPESQAVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 181
           FFNP+SQ+VEWATPWS+TAENFANATGEQGYPGGKFFDPL FAGT+++GVY+PDTEKLER
Sbjct: 164 FFNPDSQSVEWATPWSKTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLER 223

Query: 182 LKLAEIKHSRLAMVAM 229
           LKLAEIKH+R+AM+AM
Sbjct: 224 LKLAEIKHARIAMLAM 239


>dbj|BAI52949.1| light-harvesting complex II protein [Citrullus lanatus subsp.
           vulgaris]
          Length = 255

 Score =  145 bits (367), Expect = 7e-33
 Identities = 66/76 (86%), Positives = 73/76 (96%)
 Frame = +2

Query: 2   FFNPESQAVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 181
           FFNPESQAVEWATPW +TAENFAN TGEQGYPGGKFFDPL FAGTI++GVY+PDTEKLER
Sbjct: 161 FFNPESQAVEWATPWLRTAENFANTTGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLER 220

Query: 182 LKLAEIKHSRLAMVAM 229
           LKLAEIKH+R+AM+AM
Sbjct: 221 LKLAEIKHARIAMLAM 236


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
           [Vitis vinifera] gi|147804704|emb|CAN71620.1|
           hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  145 bits (367), Expect = 7e-33
 Identities = 66/76 (86%), Positives = 74/76 (97%)
 Frame = +2

Query: 2   FFNPESQAVEWATPWSQTAENFANATGEQGYPGGKFFDPLSFAGTIQNGVYVPDTEKLER 181
           FFNPESQ+VEWATPWS+TAENFANATGEQGYPGGKFFDPLS AGTI++GVY+PD EKLER
Sbjct: 163 FFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLER 222

Query: 182 LKLAEIKHSRLAMVAM 229
           LKLAEIKH+R+AM+AM
Sbjct: 223 LKLAEIKHARIAMLAM 238


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