BLASTX nr result

ID: Papaver23_contig00004548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004548
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm...   145   2e-32
ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246...   142   1e-31
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su...   137   3e-30
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213...   137   3e-30
gb|AFK45778.1| unknown [Medicago truncatula]                          135   1e-29

>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
           gi|223535695|gb|EEF37360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  145 bits (365), Expect = 2e-32
 Identities = 68/131 (51%), Positives = 100/131 (76%)
 Frame = -2

Query: 615 KLPVVVQLEIEKDLPKNAKCMMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKALEYAK 436
           K P  ++L+IE+DLPKNAKC+MDC A   LQGIQ+Q+ +LSRDPTIKLP++F++AL++A+
Sbjct: 70  KEPQPLELKIEQDLPKNAKCLMDCEAAQVLQGIQEQMVLLSRDPTIKLPVSFDRALQHAR 129

Query: 435 GSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRLTTEGAI 256
             +R++NP +V   LE L+   ++E E+C I+NVCPD VDEV+AL+PSLK+ +      +
Sbjct: 130 TGARFTNPQSVRRILEGLKKHGVSEGEICTIANVCPDGVDEVFALVPSLKSKKNVLREPL 189

Query: 255 KNLLYELDNLK 223
           K++L +L  LK
Sbjct: 190 KDILGQLSELK 200


>ref|XP_002274855.1| PREDICTED: uncharacterized protein LOC100246461 isoform 1 [Vitis
           vinifera] gi|359495604|ref|XP_003635035.1| PREDICTED:
           uncharacterized protein LOC100246461 isoform 2 [Vitis
           vinifera] gi|297736694|emb|CBI25730.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  142 bits (357), Expect = 1e-31
 Identities = 67/132 (50%), Positives = 96/132 (72%)
 Frame = -2

Query: 618 PKLPVVVQLEIEKDLPKNAKCMMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKALEYA 439
           PK P  ++L IE++LPKNAKCMMDC A   L+GIQ+Q+ +LS DPTIK+PL+FNK L+YA
Sbjct: 93  PKPPAPLELRIEQELPKNAKCMMDCEAALILKGIQEQMVVLSEDPTIKIPLSFNKGLQYA 152

Query: 438 KGSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRLTTEGA 259
           + S+ Y++P +V   LE L    +++ E+C+I+N CP+T+DEV+AL+PSLK    T    
Sbjct: 153 QSSNCYASPQSVRLVLEPLSKYGVSDGEICVIANTCPETIDEVFALVPSLKPKWSTLREP 212

Query: 258 IKNLLYELDNLK 223
           +K++L  L  LK
Sbjct: 213 LKDVLRGLAELK 224


>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Cucumis sativus]
          Length = 220

 Score =  137 bits (345), Expect = 3e-30
 Identities = 69/134 (51%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
 Frame = -2

Query: 615 KLPVVVQLEIEKDLPKNAKC--MMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKALEY 442
           K P  ++L+IE++LPKN KC  +MDC A   LQGIQDQ+  LS DPTIK+P +F++ L+Y
Sbjct: 86  KEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQY 145

Query: 441 AKGSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRLTTEG 262
           AK ++ Y N  +V   LE L+   +T+SE+C+I+NVCPDT DEV+AL+PSLK  R     
Sbjct: 146 AKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSE 205

Query: 261 AIKNLLYELDNLKS 220
            I N+L EL  +KS
Sbjct: 206 PINNVLSELAKVKS 219


>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
          Length = 242

 Score =  137 bits (345), Expect = 3e-30
 Identities = 69/134 (51%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
 Frame = -2

Query: 615 KLPVVVQLEIEKDLPKNAKC--MMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKALEY 442
           K P  ++L+IE++LPKN KC  +MDC A   LQGIQDQ+  LS DPTIK+P +F++ L+Y
Sbjct: 86  KEPQALELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQY 145

Query: 441 AKGSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRLTTEG 262
           AK ++ Y N  +V   LE L+   +T+SE+C+I+NVCPDT DEV+AL+PSLK  R     
Sbjct: 146 AKRANHYVNAESVRPVLETLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSE 205

Query: 261 AIKNLLYELDNLKS 220
            I N+L EL  +KS
Sbjct: 206 PINNVLSELAKVKS 219


>gb|AFK45778.1| unknown [Medicago truncatula]
          Length = 201

 Score =  135 bits (340), Expect = 1e-29
 Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 2/135 (1%)
 Frame = -2

Query: 621 APKLPVVVQLEIEKDLPKNAKCMMDCAAEAALQGIQDQLSILSRDPTIKLPLAFNKALEY 442
           A K P   +  ++++LP+N KC+MDC A   LQGIQDQ+  LSRDP+IK+P +F+K L Y
Sbjct: 64  AAKDPHQFEHRVDQELPENFKCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGLYY 123

Query: 441 AK--GSSRYSNPLAVWHALEKLRVLKITESELCLISNVCPDTVDEVYALIPSLKTNRLTT 268
           AK   SS+YSNP +V H LE L    +TESE+C+I+NVCP+T DEV+AL+PSLK+ R   
Sbjct: 124 AKSSSSSKYSNPESVRHTLEPLMNHDLTESEICVIANVCPETADEVFALLPSLKSKRGIN 183

Query: 267 EGAIKNLLYELDNLK 223
              ++  L EL   K
Sbjct: 184 SQPVEEALSELAKFK 198


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