BLASTX nr result

ID: Papaver23_contig00004510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00004510
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putat...   189   3e-46
ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   184   8e-45
ref|XP_002329033.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002894329.1| ubiquitin-specific protease 6 [Arabidopsis l...   178   4e-43

>ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223525817|gb|EEF28259.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 482

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/131 (69%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
 Frame = -3

Query: 416 RKLLRDEEGRKAGLKIDEKKS--KDTDVKMLDXXXXXXXXXXXXXXXSQEGATSESEGQL 243
           R++LRDEEGRK GLK++EK S  KD DVKM D               S+EG +S     L
Sbjct: 350 RQILRDEEGRKLGLKVNEKSSGSKDNDVKMTDAEGPSSGSGESSKATSEEGESSHKVSSL 409

Query: 242 TGVYELVSVLTHKGRSADSGHYVAWVKQESGKWIQFDDDNPIPQREEDITKLSGGGDWHM 63
           TG+Y+LV+VLTHKGRSADSGHYVAWVKQESGKWI++DDDNPIPQREEDITKLSGGGDWHM
Sbjct: 410 TGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPIPQREEDITKLSGGGDWHM 469

Query: 62  AYICMYKARVI 30
           AYICMYKAR +
Sbjct: 470 AYICMYKARAV 480


>ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|222835980|gb|EEE74401.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/129 (68%), Positives = 100/129 (77%), Gaps = 2/129 (1%)
 Frame = -3

Query: 416 RKLLRDEEGRKAGLK--IDEKKSKDTDVKMLDXXXXXXXXXXXXXXXSQEGATSESEGQL 243
           R++LRDEEG+KAGLK  +    SKD D KM D               S EG +S+ E  L
Sbjct: 350 RQILRDEEGKKAGLKAKVKSSSSKDNDAKMTDVEGPSNESVKSSNSTSGEGGSSDKESHL 409

Query: 242 TGVYELVSVLTHKGRSADSGHYVAWVKQESGKWIQFDDDNPIPQREEDITKLSGGGDWHM 63
           TG+Y+LV+VLTHKGRSADSGHYVAWVKQESGKWI++DDDNPIPQREEDITKLSGGGDWHM
Sbjct: 410 TGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPIPQREEDITKLSGGGDWHM 469

Query: 62  AYICMYKAR 36
           AYICMYKAR
Sbjct: 470 AYICMYKAR 478


>ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Vitis vinifera]
           gi|297743111|emb|CBI35978.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/129 (69%), Positives = 99/129 (76%)
 Frame = -3

Query: 416 RKLLRDEEGRKAGLKIDEKKSKDTDVKMLDXXXXXXXXXXXXXXXSQEGATSESEGQLTG 237
           R++LRDEEG+K GLK     SKD DVKM D               S EG  ++ E  LTG
Sbjct: 351 RQILRDEEGKKLGLK--NSASKDNDVKMADAEGSSNRSGESSLATSDEGVPTDKETHLTG 408

Query: 236 VYELVSVLTHKGRSADSGHYVAWVKQESGKWIQFDDDNPIPQREEDITKLSGGGDWHMAY 57
           +Y+LV+VLTHKGRSADSGHYVAWVKQESGKWI+FDDDNPIPQREEDITKLSGGGDWHMAY
Sbjct: 409 IYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEFDDDNPIPQREEDITKLSGGGDWHMAY 468

Query: 56  ICMYKARVI 30
           ICMYKAR I
Sbjct: 469 ICMYKARTI 477


>ref|XP_002329033.1| predicted protein [Populus trichocarpa] gi|222839704|gb|EEE78027.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score =  179 bits (455), Expect = 2e-43
 Identities = 89/131 (67%), Positives = 101/131 (77%), Gaps = 2/131 (1%)
 Frame = -3

Query: 416 RKLLRDEEGRKAGLKIDEKKS--KDTDVKMLDXXXXXXXXXXXXXXXSQEGATSESEGQL 243
           R++LRDEEG+KAGLK  EK S  KD DVKM D               S+E    + +  L
Sbjct: 358 RQILRDEEGKKAGLKAKEKTSGSKDNDVKMTDVERPSNESGESSKPTSKE----DKKSHL 413

Query: 242 TGVYELVSVLTHKGRSADSGHYVAWVKQESGKWIQFDDDNPIPQREEDITKLSGGGDWHM 63
           TG+Y+LV+VLTHKGRSADSGHYVAWVKQESGKWI+FDDDNP+PQREEDITKLSGGGDWHM
Sbjct: 414 TGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEFDDDNPVPQREEDITKLSGGGDWHM 473

Query: 62  AYICMYKARVI 30
           AYICMYKAR +
Sbjct: 474 AYICMYKARTV 484


>ref|XP_002894329.1| ubiquitin-specific protease 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297340171|gb|EFH70588.1| ubiquitin-specific protease
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/130 (67%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
 Frame = -3

Query: 416 RKLLRDEEGRKAGLKIDEKK-SKDTDVKMLDXXXXXXXXXXXXXXXSQEGATSESEGQLT 240
           R+ LRDEEG+K GL+   K  SKD+DVKM D                QEGA+SE E  +T
Sbjct: 351 RQKLRDEEGKKLGLQTSAKSGSKDSDVKMTDAEASANGSGESSTVNPQEGASSEKETHMT 410

Query: 239 GVYELVSVLTHKGRSADSGHYVAWVKQESGKWIQFDDDNPIPQREEDITKLSGGGDWHMA 60
           G+Y+LV+VLTHKGRSADSGHYVAWVKQESGKWIQ+DDDNP  QREEDITKLSGGGDWHMA
Sbjct: 411 GIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPSMQREEDITKLSGGGDWHMA 470

Query: 59  YICMYKARVI 30
           YI MYKAR +
Sbjct: 471 YITMYKARFV 480


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