BLASTX nr result

ID: Papaver23_contig00003997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003997
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [C...   513   e-143
ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis ...   511   e-143
ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex...   503   e-140
gb|ABR16746.1| unknown [Picea sitchensis]                             501   e-140
ref|XP_002514031.1| AP-4 complex subunit mu-1, putative [Ricinus...   496   e-138

>ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [Cucumis sativus]
          Length = 451

 Score =  513 bits (1320), Expect = e-143
 Identities = 253/284 (89%), Positives = 273/284 (96%)
 Frame = +3

Query: 39   SVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL 218
            +VTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRL
Sbjct: 168  AVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRL 227

Query: 219  ALNEDLNIGRGGRSIYDYSSSGGAGAVILDDCNFHESVHLDSFDMDRTLSLVPPDGEFPV 398
            ALNEDL+IG+GGRSIYDYSSS G G VILDDCNFHESVHL++FD+DRTL LVPP+GEFPV
Sbjct: 228  ALNEDLSIGKGGRSIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPV 287

Query: 399  MNYRMTQEFKPPFRINALIEEAGAFKAEVILKVRAEYSSNITANTVAIQMPLPKYTTRVS 578
            MNYRMTQEFKPPFRINALIEEAG+ KAEVILKVRAE++S+ITANT+ IQMPLP +TTRVS
Sbjct: 288  MNYRMTQEFKPPFRINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVS 347

Query: 579  FELEPGAVGNTTDFKESTKKLEWGLKKIVGGSEHTLRAKLTFSQESLANIMKEAGPVSMT 758
            FELEPGAVGNTTDFKE+ K+LEWGLKKIVGGSEHTLRA+LTFSQES  NI+KEAGPVSMT
Sbjct: 348  FELEPGAVGNTTDFKEANKRLEWGLKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMT 407

Query: 759  FTIPMYNASKLQVRYLQIAKKSKTYNPYRWVRYVTQANSYVARL 890
            FTIPMYNAS+LQV+YLQIAKKS TYNPYRWVRYVTQANSYVARL
Sbjct: 408  FTIPMYNASRLQVKYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451


>ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis vinifera]
            gi|302142544|emb|CBI19747.3| unnamed protein product
            [Vitis vinifera]
          Length = 451

 Score =  511 bits (1316), Expect = e-143
 Identities = 252/284 (88%), Positives = 272/284 (95%)
 Frame = +3

Query: 39   SVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL 218
            +VTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRL
Sbjct: 168  AVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRL 227

Query: 219  ALNEDLNIGRGGRSIYDYSSSGGAGAVILDDCNFHESVHLDSFDMDRTLSLVPPDGEFPV 398
            ALNE+L+IGRGGRSIYDY+SS G+G VILDDCNFHESVHLDSFD+DRTL+LVPPDGEFPV
Sbjct: 228  ALNEELSIGRGGRSIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPV 287

Query: 399  MNYRMTQEFKPPFRINALIEEAGAFKAEVILKVRAEYSSNITANTVAIQMPLPKYTTRVS 578
            MNYRMTQEFKPPFRINALIEEAGA +AEVILKVRAE+ S+ITANT+ +QMPLP YTTRVS
Sbjct: 288  MNYRMTQEFKPPFRINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVS 347

Query: 579  FELEPGAVGNTTDFKESTKKLEWGLKKIVGGSEHTLRAKLTFSQESLANIMKEAGPVSMT 758
            FELEPGAVGNTTDFKE+ K+LEWGLKKIVGGSEHTLRAKLTFSQE   NI +EAGPVSMT
Sbjct: 348  FELEPGAVGNTTDFKEANKRLEWGLKKIVGGSEHTLRAKLTFSQELHGNITREAGPVSMT 407

Query: 759  FTIPMYNASKLQVRYLQIAKKSKTYNPYRWVRYVTQANSYVARL 890
            FTIPMYNAS+LQV+YLQI+KKSK YNPYRWVRYVTQ+NSYVARL
Sbjct: 408  FTIPMYNASRLQVKYLQISKKSKAYNPYRWVRYVTQSNSYVARL 451


>ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex subunit mu-1-like
            [Cucumis sativus]
          Length = 451

 Score =  503 bits (1296), Expect = e-140
 Identities = 251/284 (88%), Positives = 270/284 (95%)
 Frame = +3

Query: 39   SVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL 218
            +VTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRL
Sbjct: 168  AVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRL 227

Query: 219  ALNEDLNIGRGGRSIYDYSSSGGAGAVILDDCNFHESVHLDSFDMDRTLSLVPPDGEFPV 398
            ALNEDL+IGRGGRSIYDYSSS G G VILDDCNFHESVHL++FD+DRTL LVPP+GEFPV
Sbjct: 228  ALNEDLSIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPV 287

Query: 399  MNYRMTQEFKPPFRINALIEEAGAFKAEVILKVRAEYSSNITANTVAIQMPLPKYTTRVS 578
            MNYRMTQEFKPPFRINALIEEAG+ KAEVILKVRAE++S+ITANT+ IQMPLP +TTRVS
Sbjct: 288  MNYRMTQEFKPPFRINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVS 347

Query: 579  FELEPGAVGNTTDFKESTKKLEWGLKKIVGGSEHTLRAKLTFSQESLANIMKEAGPVSMT 758
            FELEPGAVGNTTDFKE+ K+LE   KKIVGGSEHTLRA+LTFSQES  NI+KEAGPVSMT
Sbjct: 348  FELEPGAVGNTTDFKEANKRLEXVWKKIVGGSEHTLRARLTFSQESHGNIVKEAGPVSMT 407

Query: 759  FTIPMYNASKLQVRYLQIAKKSKTYNPYRWVRYVTQANSYVARL 890
            FTIPMYNAS+LQV+YLQIAKKS TYNPYRWVRYVTQANSYVARL
Sbjct: 408  FTIPMYNASRLQVKYLQIAKKSNTYNPYRWVRYVTQANSYVARL 451


>gb|ABR16746.1| unknown [Picea sitchensis]
          Length = 451

 Score =  501 bits (1291), Expect = e-140
 Identities = 246/284 (86%), Positives = 268/284 (94%)
 Frame = +3

Query: 39   SVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL 218
            +VTKSVVANEPGGRKREE+FVD+IEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL
Sbjct: 168  AVTKSVVANEPGGRKREEVFVDVIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL 227

Query: 219  ALNEDLNIGRGGRSIYDYSSSGGAGAVILDDCNFHESVHLDSFDMDRTLSLVPPDGEFPV 398
            ALNEDL+IGR G S YDYSSS GAG VILDDCNFHESV LD+FD+DRTL+LVPPDGEFPV
Sbjct: 228  ALNEDLSIGRSGHSSYDYSSSSGAGMVILDDCNFHESVRLDNFDLDRTLTLVPPDGEFPV 287

Query: 399  MNYRMTQEFKPPFRINALIEEAGAFKAEVILKVRAEYSSNITANTVAIQMPLPKYTTRVS 578
            MNYRMTQEFKPPFR+NALIEEAG+ KAEV+LKVRA++SS+ITANTVA+QMPLPKYTTRVS
Sbjct: 288  MNYRMTQEFKPPFRVNALIEEAGSLKAEVMLKVRADFSSSITANTVALQMPLPKYTTRVS 347

Query: 579  FELEPGAVGNTTDFKESTKKLEWGLKKIVGGSEHTLRAKLTFSQESLANIMKEAGPVSMT 758
            F+LEPGAVG TTDFKE  K LEWGL+KIVGGSEHTLRAKLTFSQE+  NI KE+GPVSMT
Sbjct: 348  FDLEPGAVGQTTDFKEGNKMLEWGLRKIVGGSEHTLRAKLTFSQETNMNITKESGPVSMT 407

Query: 759  FTIPMYNASKLQVRYLQIAKKSKTYNPYRWVRYVTQANSYVARL 890
            FTIPMY+AS+LQVRYLQI KKS+TYNPYRWVRYVTQANSYV R+
Sbjct: 408  FTIPMYSASRLQVRYLQIVKKSRTYNPYRWVRYVTQANSYVIRI 451


>ref|XP_002514031.1| AP-4 complex subunit mu-1, putative [Ricinus communis]
           gi|223547117|gb|EEF48614.1| AP-4 complex subunit mu-1,
           putative [Ricinus communis]
          Length = 421

 Score =  496 bits (1276), Expect = e-138
 Identities = 248/285 (87%), Positives = 263/285 (92%), Gaps = 1/285 (0%)
 Frame = +3

Query: 39  SVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL 218
           +VTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL
Sbjct: 137 AVTKSVVANEPGGRKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRL 196

Query: 219 ALNEDLNIGRG-GRSIYDYSSSGGAGAVILDDCNFHESVHLDSFDMDRTLSLVPPDGEFP 395
           ALNEDL IGRG GRS+YDY SS G+GAVILDDCNFHESV LD+FD+DRTL+LVPPDGEFP
Sbjct: 197 ALNEDLGIGRGSGRSVYDYRSSSGSGAVILDDCNFHESVRLDNFDLDRTLTLVPPDGEFP 256

Query: 396 VMNYRMTQEFKPPFRINALIEEAGAFKAEVILKVRAEYSSNITANTVAIQMPLPKYTTRV 575
           VMNYRMTQEFKPPFRIN LIEEAGA KAEVILK+ AE+ S+ITANT+ IQM LPKYTTR 
Sbjct: 257 VMNYRMTQEFKPPFRINTLIEEAGALKAEVILKISAEFPSSITANTINIQMSLPKYTTRA 316

Query: 576 SFELEPGAVGNTTDFKESTKKLEWGLKKIVGGSEHTLRAKLTFSQESLANIMKEAGPVSM 755
           +FELEPG  G T DFKE+ KKLEWGLKKIVGGSEHTLRAKLTFSQE   NI KEAGPVSM
Sbjct: 317 TFELEPGVFGQTADFKEANKKLEWGLKKIVGGSEHTLRAKLTFSQELHGNITKEAGPVSM 376

Query: 756 TFTIPMYNASKLQVRYLQIAKKSKTYNPYRWVRYVTQANSYVARL 890
           TFTIPMYNAS+LQV+YLQIAKKS TYNPYRWVRYVTQANSYVAR+
Sbjct: 377 TFTIPMYNASRLQVKYLQIAKKSNTYNPYRWVRYVTQANSYVARI 421


Top