BLASTX nr result

ID: Papaver23_contig00003943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003943
         (1705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|2...   174   8e-41
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...   172   2e-40
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   172   2e-40
ref|XP_003549807.1| PREDICTED: transcription initiation factor T...   142   3e-31
ref|XP_003549806.1| PREDICTED: transcription initiation factor T...   142   3e-31

>ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|222868453|gb|EEF05584.1|
            predicted protein [Populus trichocarpa]
          Length = 1359

 Score =  174 bits (440), Expect = 8e-41
 Identities = 139/374 (37%), Positives = 188/374 (50%), Gaps = 3/374 (0%)
 Frame = +3

Query: 54   KLRISRPQEPFSDVLVVPINNLPETPANVIDLSKEADSVSNGSERRRPIVKIXXXXXXXX 233
            K+ ++ P+E   +V V   +   + P      SKE D++SN  ERRRP+VKI        
Sbjct: 1055 KMDMAIPEEASEEVAVPEASKETDIPV----ASKEEDNISNSHERRRPVVKIRVKHSAAS 1110

Query: 234  XXXEEADHIVVDKSQGGKNDVLERGASSSMSVDAPPR-NTENVSTSNQNLEEVNSCHDFG 410
               EE D   V++SQGG ++  +RGASSS+SVDAP R +TE VS S QNLEEVNSC D G
Sbjct: 1111 SRAEETDIQNVERSQGGHHET-DRGASSSVSVDAPQRISTEAVSISYQNLEEVNSCLDHG 1169

Query: 411  SRMTASIGSVRILNDEDEIRKELQCTAESGKAASTAPLQHQLEDCFSPSIKGSEGEGETE 590
            SRM+ASIGS ++ +D D   KELQCTAES K +    +  Q +D  SP +   +   +T+
Sbjct: 1170 SRMSASIGSAKLASDGDNFGKELQCTAESSKVS----MHPQPDDPSSPRVM-QDNLVDTD 1224

Query: 591  VKKYMSLETMSIERYDHEGRQPSAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKG- 767
             +++ SL+T+S+ER + +G++                                   HKG 
Sbjct: 1225 AQRFASLQTLSVERVNPDGKEKE--------------------KKKDKEKKRKREDHKGH 1264

Query: 768  RDDPXXXXXXXXXXXXXXXXXXXXXXXXXXQSLQAPSSLKEGILKETEMTKLLSRSAEAS 947
            RDDP                          + L+     KE   KE EMTKLLS  A+A+
Sbjct: 1265 RDDP--------------------------EYLERKLLKKEKKRKEKEMTKLLSGGAKAT 1298

Query: 948  QKPRIKIETSPSEIPRVKIEGNPIVKSAKVQLKPIESSGSKVVIKTEETKVGDNGEGSSL 1127
                        E+P       P +K A V LKP + S SK V    ETK  +  EG+S+
Sbjct: 1299 S----------VELPGK--NEKPTIKLATVPLKPNQPSESKAVATNIETK-PEPSEGTSV 1345

Query: 1128 PKIRIKIK-RTLNN 1166
            PK RIKIK RTLN+
Sbjct: 1346 PKFRIKIKNRTLNS 1359


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 1 [Vitis vinifera]
          Length = 1325

 Score =  172 bits (436), Expect = 2e-40
 Identities = 132/349 (37%), Positives = 180/349 (51%), Gaps = 13/349 (3%)
 Frame = +3

Query: 144  DLSKEADSVSNGSERRRPIVKIXXXXXXXXXXXEEADHIVVDKSQGGKNDVLERGASSSM 323
            + S+EAD+VSN  ER+ P+VKI           EEAD+  VDKSQGG N++ +RG SSS+
Sbjct: 1025 EASREADTVSNSHERKMPVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEI-DRGGSSSI 1083

Query: 324  SVDAPPRN-TENVSTSNQNLEEVNSCHDFGSRMTASIGSVRILNDEDEIRKELQCTAESG 500
            SVDAP RN TE VS SNQNLEEVNSCHD GS+MTASIGS ++ +D DE+ KELQCTA+SG
Sbjct: 1084 SVDAPQRNFTEAVSISNQNLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQCTADSG 1143

Query: 501  K-----AASTAPLQHQLEDCFSPSIKGSEGEGETEVKKYMSLETMSIERYDHEGRQPSAM 665
            K      +   PL   ++D    SI+  +   + + +KY SL+T+S+ R++ E ++    
Sbjct: 1144 KISVLPPSDEGPLFSGIQDIQGGSIQ--DNIVDVDAQKYASLQTLSVMRHEVEAKEKKEK 1201

Query: 666  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKGRDDPXXXXXXXXXXXXXXXXXXXXXX 845
                                            + R+DP                      
Sbjct: 1202 EK-----------------------------KRKREDP-------------EYLERKRLK 1219

Query: 846  XXXXQSLQAPSSLKEGILKETE--MTKLLSRSAEASQKPRIKI-----ETSPSEIPRVKI 1004
                Q  +  + L  G  K+ E  M++LLS  A+  +K   ++     + S  E+   K+
Sbjct: 1220 KEKKQKEKEMAQLLSGEAKQKEKEMSELLSGEAKQKEKEMTELLSGDAKASSVELGVKKV 1279

Query: 1005 EGNPIVKSAKVQLKPIESSGSKVVIKTEETKVGDNGEGSSLPKIRIKIK 1151
            E    +K A VQ K  ESS SK+V     TKV +  EGSS PK RIKIK
Sbjct: 1280 ESG--IKLATVQYKASESSVSKIV----TTKV-EASEGSSAPKFRIKIK 1321


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  172 bits (436), Expect = 2e-40
 Identities = 132/349 (37%), Positives = 180/349 (51%), Gaps = 13/349 (3%)
 Frame = +3

Query: 144  DLSKEADSVSNGSERRRPIVKIXXXXXXXXXXXEEADHIVVDKSQGGKNDVLERGASSSM 323
            + S+EAD+VSN  ER+ P+VKI           EEAD+  VDKSQGG N++ +RG SSS+
Sbjct: 1045 EASREADTVSNSHERKMPVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEI-DRGGSSSI 1103

Query: 324  SVDAPPRN-TENVSTSNQNLEEVNSCHDFGSRMTASIGSVRILNDEDEIRKELQCTAESG 500
            SVDAP RN TE VS SNQNLEEVNSCHD GS+MTASIGS ++ +D DE+ KELQCTA+SG
Sbjct: 1104 SVDAPQRNFTEAVSISNQNLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQCTADSG 1163

Query: 501  K-----AASTAPLQHQLEDCFSPSIKGSEGEGETEVKKYMSLETMSIERYDHEGRQPSAM 665
            K      +   PL   ++D    SI+  +   + + +KY SL+T+S+ R++ E ++    
Sbjct: 1164 KISVLPPSDEGPLFSGIQDIQGGSIQ--DNIVDVDAQKYASLQTLSVMRHEVEAKEKKEK 1221

Query: 666  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKGRDDPXXXXXXXXXXXXXXXXXXXXXX 845
                                            + R+DP                      
Sbjct: 1222 EK-----------------------------KRKREDP-------------EYLERKRLK 1239

Query: 846  XXXXQSLQAPSSLKEGILKETE--MTKLLSRSAEASQKPRIKI-----ETSPSEIPRVKI 1004
                Q  +  + L  G  K+ E  M++LLS  A+  +K   ++     + S  E+   K+
Sbjct: 1240 KEKKQKEKEMAQLLSGEAKQKEKEMSELLSGEAKQKEKEMTELLSGDAKASSVELGVKKV 1299

Query: 1005 EGNPIVKSAKVQLKPIESSGSKVVIKTEETKVGDNGEGSSLPKIRIKIK 1151
            E    +K A VQ K  ESS SK+V     TKV +  EGSS PK RIKIK
Sbjct: 1300 ESG--IKLATVQYKASESSVSKIV----TTKV-EASEGSSAPKFRIKIK 1341


>ref|XP_003549807.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 2 [Glycine max]
          Length = 1368

 Score =  142 bits (358), Expect = 3e-31
 Identities = 127/371 (34%), Positives = 179/371 (48%), Gaps = 5/371 (1%)
 Frame = +3

Query: 63   ISRPQEPFSDVLVVPINNLPETPANVIDLSKEADSVSNGSERRRPI-VKIXXXXXXXXXX 239
            + +P+E F++    P     E P    ++SKEAD+VSN  ER+RPI +K+          
Sbjct: 1057 LEKPKEVFTEF---PQEAPIEAPN---EISKEADTVSNSHERKRPIKIKVKQSSATSRA- 1109

Query: 240  XEEADHIVVDKSQGGKNDVLERGASSSMSVDAPPRN-TENVSTSNQNLEEVNSCHDFGSR 416
              + D+ VV++S GG+N+ ++ GASSS+SVDAP RN  E VS SN N++EVNS HD GSR
Sbjct: 1110 --DTDNQVVERSLGGRNE-MDHGASSSVSVDAPQRNFAETVSISNHNIDEVNSWHDRGSR 1166

Query: 417  MTASIGSVRILNDEDEIRKELQCTAESGKAASTAPLQHQLEDCFSPSIKGSEGEGETEVK 596
            MTASIGS + L+D DE+ KELQCTA+S    S    Q Q ED  S SI   +   + + +
Sbjct: 1167 MTASIGSAKFLSDGDELVKELQCTADSSIVYS----QPQPEDPSSSSII-QDNNIDADAR 1221

Query: 597  KYMSLETMSIERYDHEGRQPSAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKGRDD 776
            +Y SL+T+S+ R+D +G                                    GH   DD
Sbjct: 1222 RYASLQTLSVARFDPDGE--------PLGKEISARGKEKHKSKEKKRKRESNKGH--HDD 1271

Query: 777  PXXXXXXXXXXXXXXXXXXXXXXXXXXQSLQAPSSLKEGILKETEMTKLLSRSAEASQKP 956
            P                          + L+     KE   +E E+ KL S  A+ S   
Sbjct: 1272 P--------------------------EYLERKRLKKEKKRREKELAKLQSDEAKRSS-- 1303

Query: 957  RIKIETSPSEIPRVKIEGNPIVKSAKVQLKPIESSG--SKVVIKTEETKVGDNGEGSS-L 1127
             I + +   E         P+V     Q+  +E +G  SK+ IK  +T   +  EG+S  
Sbjct: 1304 -IDMSSKKEE---------PVVDVVARQVTSVEPTGYDSKLEIKKIDTTKPEPSEGTSGA 1353

Query: 1128 PKIRIKIKRTL 1160
            PKIRIKIK  +
Sbjct: 1354 PKIRIKIKNRM 1364


>ref|XP_003549806.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 1 [Glycine max]
          Length = 1388

 Score =  142 bits (358), Expect = 3e-31
 Identities = 127/371 (34%), Positives = 179/371 (48%), Gaps = 5/371 (1%)
 Frame = +3

Query: 63   ISRPQEPFSDVLVVPINNLPETPANVIDLSKEADSVSNGSERRRPI-VKIXXXXXXXXXX 239
            + +P+E F++    P     E P    ++SKEAD+VSN  ER+RPI +K+          
Sbjct: 1077 LEKPKEVFTEF---PQEAPIEAPN---EISKEADTVSNSHERKRPIKIKVKQSSATSRA- 1129

Query: 240  XEEADHIVVDKSQGGKNDVLERGASSSMSVDAPPRN-TENVSTSNQNLEEVNSCHDFGSR 416
              + D+ VV++S GG+N+ ++ GASSS+SVDAP RN  E VS SN N++EVNS HD GSR
Sbjct: 1130 --DTDNQVVERSLGGRNE-MDHGASSSVSVDAPQRNFAETVSISNHNIDEVNSWHDRGSR 1186

Query: 417  MTASIGSVRILNDEDEIRKELQCTAESGKAASTAPLQHQLEDCFSPSIKGSEGEGETEVK 596
            MTASIGS + L+D DE+ KELQCTA+S    S    Q Q ED  S SI   +   + + +
Sbjct: 1187 MTASIGSAKFLSDGDELVKELQCTADSSIVYS----QPQPEDPSSSSII-QDNNIDADAR 1241

Query: 597  KYMSLETMSIERYDHEGRQPSAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKGRDD 776
            +Y SL+T+S+ R+D +G                                    GH   DD
Sbjct: 1242 RYASLQTLSVARFDPDGE--------PLGKEISARGKEKHKSKEKKRKRESNKGH--HDD 1291

Query: 777  PXXXXXXXXXXXXXXXXXXXXXXXXXXQSLQAPSSLKEGILKETEMTKLLSRSAEASQKP 956
            P                          + L+     KE   +E E+ KL S  A+ S   
Sbjct: 1292 P--------------------------EYLERKRLKKEKKRREKELAKLQSDEAKRSS-- 1323

Query: 957  RIKIETSPSEIPRVKIEGNPIVKSAKVQLKPIESSG--SKVVIKTEETKVGDNGEGSS-L 1127
             I + +   E         P+V     Q+  +E +G  SK+ IK  +T   +  EG+S  
Sbjct: 1324 -IDMSSKKEE---------PVVDVVARQVTSVEPTGYDSKLEIKKIDTTKPEPSEGTSGA 1373

Query: 1128 PKIRIKIKRTL 1160
            PKIRIKIK  +
Sbjct: 1374 PKIRIKIKNRM 1384


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