BLASTX nr result

ID: Papaver23_contig00003936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003936
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546458.1| PREDICTED: 30S ribosomal protein S17, chloro...   139   5e-31
ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|2...   139   7e-31
ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloro...   137   2e-30
ref|XP_003542097.1| PREDICTED: rho guanine nucleotide exchange f...   137   2e-30
emb|CBI36128.3| unnamed protein product [Vitis vinifera]              136   5e-30

>ref|XP_003546458.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Glycine
           max]
          Length = 143

 Score =  139 bits (351), Expect = 5e-31
 Identities = 73/115 (63%), Positives = 86/115 (74%), Gaps = 3/115 (2%)
 Frame = +2

Query: 68  KIRSNFFNG---GASILNKXXXXXXXXXXXXXXAPLQIRAMRTMQGKVVCSTNDKTVAVE 238
           ++ + F NG   G+S+L K                 QI AM+TMQGKVVCSTNDKTVAVE
Sbjct: 5   QLSTPFLNGHGHGSSLLWKPSSAVTQTHWAPPSLLPQINAMKTMQGKVVCSTNDKTVAVE 64

Query: 239 VVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQLEKSRPISKTKSFLAVALP 403
           VVRLAPHPKYKRRVR KKK+QAHDP+NQF VGD VQL+K+RPISKTK+FLA+ +P
Sbjct: 65  VVRLAPHPKYKRRVRKKKKYQAHDPDNQFNVGDIVQLQKTRPISKTKAFLALPVP 119


>ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|222845480|gb|EEE83027.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  139 bits (350), Expect = 7e-31
 Identities = 67/78 (85%), Positives = 74/78 (94%)
 Frame = +2

Query: 170 IRAMRTMQGKVVCSTNDKTVAVEVVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQL 349
           IRAM+++QGKVVC+T+DKTVAVEV RLAPHPKYKRRVR KKK+QAHDPENQFKVGD VQL
Sbjct: 51  IRAMKSLQGKVVCATSDKTVAVEVTRLAPHPKYKRRVRKKKKYQAHDPENQFKVGDLVQL 110

Query: 350 EKSRPISKTKSFLAVALP 403
           EKSRPISKTKSFLAV +P
Sbjct: 111 EKSRPISKTKSFLAVPVP 128


>ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis
           sativus] gi|449519627|ref|XP_004166836.1| PREDICTED: 30S
           ribosomal protein S17, chloroplastic-like [Cucumis
           sativus]
          Length = 164

 Score =  137 bits (346), Expect = 2e-30
 Identities = 63/78 (80%), Positives = 75/78 (96%)
 Frame = +2

Query: 170 IRAMRTMQGKVVCSTNDKTVAVEVVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQL 349
           IRAMR++QG+VVC+TNDKTVAVEVVRLAPHPKYKRR+RIKKK+QAHDP+NQF+VGDFV+L
Sbjct: 59  IRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFQVGDFVEL 118

Query: 350 EKSRPISKTKSFLAVALP 403
           EK RPISK K+FLA+ +P
Sbjct: 119 EKCRPISKMKTFLAIPVP 136


>ref|XP_003542097.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Glycine
           max]
          Length = 710

 Score =  137 bits (346), Expect = 2e-30
 Identities = 65/79 (82%), Positives = 75/79 (94%)
 Frame = +2

Query: 167 QIRAMRTMQGKVVCSTNDKTVAVEVVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQ 346
           QI AM+TMQG+VVCST+DKTVAVEVVRLAPHPKYKRRVR KKK+QAHDP+NQFKVGD VQ
Sbjct: 610 QINAMKTMQGRVVCSTSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDIVQ 669

Query: 347 LEKSRPISKTKSFLAVALP 403
           L+K+RPISKTK+FLA+ +P
Sbjct: 670 LQKTRPISKTKAFLALPVP 688


>emb|CBI36128.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  136 bits (343), Expect = 5e-30
 Identities = 64/78 (82%), Positives = 75/78 (96%)
 Frame = +2

Query: 170 IRAMRTMQGKVVCSTNDKTVAVEVVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQL 349
           IRAM++MQG+VVC+T+DKTVAVEVVRLAPHPKYKRRVR KKK+QAHDP+NQFKVGD VQL
Sbjct: 88  IRAMKSMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQL 147

Query: 350 EKSRPISKTKSFLAVALP 403
           EKSRPISKTK+F+A+ +P
Sbjct: 148 EKSRPISKTKTFVAIPVP 165


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