BLASTX nr result

ID: Papaver23_contig00003935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003935
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloro...   100   2e-19
gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Ara...   100   2e-19
ref|NP_178103.1| 30S ribosomal protein S17 [Arabidopsis thaliana...   100   2e-19
emb|CBI36128.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloro...   100   2e-19

>ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis
           sativus] gi|449519627|ref|XP_004166836.1| PREDICTED: 30S
           ribosomal protein S17, chloroplastic-like [Cucumis
           sativus]
          Length = 164

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/52 (86%), Positives = 51/52 (98%)
 Frame = +3

Query: 282 DKTVAVEIVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQLEKSRPISK 437
           DKTVAVE+VRLAPHPKYKRR+RIKKK+QAHDP+NQF+VGDFV+LEK RPISK
Sbjct: 75  DKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFQVGDFVELEKCRPISK 126


>gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Arabidopsis thaliana]
          Length = 159

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = +3

Query: 282 DKTVAVEIVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQLEKSRPISK 437
           DKTVAVE+VRLAPHPKYKRRVR+KKK+QAHDP+NQFKVGD V+LEKSRPISK
Sbjct: 73  DKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISK 124


>ref|NP_178103.1| 30S ribosomal protein S17 [Arabidopsis thaliana]
           gi|133815|sp|P16180.1|RR17_ARATH RecName: Full=30S
           ribosomal protein S17, chloroplastic; AltName:
           Full=CS17; Flags: Precursor
           gi|12324576|gb|AAG52237.1|AC011717_5 30S ribosomal
           protein S17, chloroplast precursor (CS17); 62258-62707
           [Arabidopsis thaliana]
           gi|14423474|gb|AAK62419.1|AF386974_1 30S ribosomal
           protein S17, chloroplast precursor (CS17) [Arabidopsis
           thaliana] gi|16503|emb|CAA77502.1| Plastid ribosomal
           protein CS17 [Arabidopsis thaliana]
           gi|18377576|gb|AAL66954.1| 30S ribosomal protein S17,
           chloroplast precursor (CS17) [Arabidopsis thaliana]
           gi|332198192|gb|AEE36313.1| 30S ribosomal protein S17
           [Arabidopsis thaliana]
          Length = 149

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = +3

Query: 282 DKTVAVEIVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQLEKSRPISK 437
           DKTVAVE+VRLAPHPKYKRRVR+KKK+QAHDP+NQFKVGD V+LEKSRPISK
Sbjct: 63  DKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISK 114


>emb|CBI36128.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/52 (90%), Positives = 50/52 (96%)
 Frame = +3

Query: 282 DKTVAVEIVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQLEKSRPISK 437
           DKTVAVE+VRLAPHPKYKRRVR KKK+QAHDP+NQFKVGD VQLEKSRPISK
Sbjct: 104 DKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPISK 155


>ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Vitis
           vinifera]
          Length = 145

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/52 (90%), Positives = 50/52 (96%)
 Frame = +3

Query: 282 DKTVAVEIVRLAPHPKYKRRVRIKKKFQAHDPENQFKVGDFVQLEKSRPISK 437
           DKTVAVE+VRLAPHPKYKRRVR KKK+QAHDP+NQFKVGD VQLEKSRPISK
Sbjct: 60  DKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPISK 111


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